RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 hCG_2014768A0A024R1R8 64 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 UGP2Q16851 508 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 TRAPPC11Q7Z392 1133 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 FAM47DPA6NHR8 397 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 ARIH2O95376 493 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 ALDH1A3P47895 512 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 TAF6P49848 677 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 PAN2Q504Q3 1202 aaKnown RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 CCT8L2Q96SF2 557 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 CROCC2H7BZ55 1655 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 C17orf102A2RUQ5 167 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 AVPR1AP37288 418 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 CPT1AP50416 773 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 MTMR12Q9C0I1 747 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 RANBP17Q9H2T7 1088 aaKnown RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 CDV3Q9UKY7 258 aaKnown RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 MORC2Q9Y6X9 1032 aaPredicted RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 TMEM120BA0PK00 339 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 PRR23AA6NEV1 266 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 M0QYT0 321 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 TAL1P17542 331 aaPredicted RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 KCNT1Q5JUK3 1230 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 EFHC1Q5JVL4 640 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 MRPL1Q9BYD6 325 aaKnown RBP17.93■□□□□ 0.46
PTPRF-209ENST00000438120 KLC4Q9NSK0 619 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 ARHGAP26Q9UNA1 814 aa17.93■□□□□ 0.46
PTPRF-209ENST00000438120 AP3B1O00203 1094 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 SPRP35270 261 aaPredicted RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ARL4DP49703 201 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 GRB10Q13322 594 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 CBWD2Q8IUF1 395 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 CPB2Q96IY4 423 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 CFAP73A6NFT4 308 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 FKBP9O95302 570 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 VTNP04004 478 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ARP10275 920 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 FKBP9P1Q75LS8 142 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 NOA1Q8NC60 698 aaKnown RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ERP27Q96DN0 273 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 OTUB1Q96FW1 271 aaPredicted RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 PTGER2P43116 358 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 UBE3AQ05086 875 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 CUL2Q13617 745 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 USP38Q8NB14 1042 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 LOC100653049A0A140TA62 436 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 MAFGO15525 162 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 KRT34O76011 436 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 RAP1GAPP47736 663 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 C11orf74Q86VG3 221 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 WDR48Q8TAF3 677 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 THTPAQ9BU02 230 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ANKEF1Q9NU02 776 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ACO1P21399 889 aaKnown RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 SERPINB9P50453 376 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ABCE1P61221 599 aaKnown RBP17.92■□□□□ 0.46
PTPRF-209ENST00000438120 INPP5AQ14642 412 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ZIM3Q96PE6 472 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 DDIT4Q9NX09 232 aa17.92■□□□□ 0.46
PTPRF-209ENST00000438120 ICAM1P05362 532 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 CPA2P48052 419 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 TRADDQ15628 312 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 ACOT1Q86TX2 421 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 FBXO16Q8IX29 292 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-209ENST00000438120 KIF2BQ8N4N8 673 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 ANKS1AQ92625 1134 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 H0Y626 953 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 DENND5BQ6ZUT9 1274 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 ATG4AQ8WYN0 398 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 CDYLQ9Y232 598 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 SPHKAPQ2M3C7 1700 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 RHOBTB1O94844 696 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 CNGA3Q16281 694 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 MEI1Q5TIA1 1274 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 MIB1Q86YT6 1006 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 CLEC4FQ8N1N0 589 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 PPP2R3CQ969Q6 453 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 USP15Q9Y4E8 981 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-209ENST00000438120 ENDOD1O94919 500 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 CYP11B2P19099 503 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 COILP38432 576 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-209ENST00000438120 PLA2G4AP47712 749 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 TJAP1Q5JTD0 557 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 TTC39BQ5VTQ0 682 aaPredicted RBP17.91■□□□□ 0.46
PTPRF-209ENST00000438120 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 SLITRK1Q96PX8 696 aa17.91■□□□□ 0.46
PTPRF-209ENST00000438120 XPO6Q96QU8 1125 aaKnown RBP17.91■□□□□ 0.46
PTPRF-209ENST00000438120 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.9■□□□□ 0.46
PTPRF-209ENST00000438120 A0A1W2PQJ5 194 aa17.9■□□□□ 0.46
PTPRF-209ENST00000438120 FOXN3O00409 490 aaPredicted RBP17.9■□□□□ 0.46
PTPRF-209ENST00000438120 TROAPQ12815 778 aa17.9■□□□□ 0.46
PTPRF-209ENST00000438120 CHI3L2Q15782 390 aa17.9■□□□□ 0.46
PTPRF-209ENST00000438120 TBC1D19Q8N5T2 526 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms