RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 CREMQ03060 361 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SHHQ15465 462 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SLC18A3Q16572 532 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SGO2Q562F6 1265 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 C9orf50Q5SZB4 431 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 FAM171A1Q5VUB5 890 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 ZNF280DQ6N043 979 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 ANKS3Q6ZW76 656 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
RPE-208ENST00000436630 RNF168Q8IYW5 571 aaPredicted RBP14.28□□□□□ -0.12
RPE-208ENST00000436630 CRYBG2Q8N1P7 616 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SLC4A11Q8NBS3 891 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 WHAMMQ8TF30 809 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 AGPAT1Q99943 283 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SYT11Q9BT88 431 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 ELOVL4Q9GZR5 314 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
RPE-208ENST00000436630 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 OR6C75A6NL08 312 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 EIF3CLB5ME19 914 aaKnown RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 H0YGN5 161 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 I3L4J1 428 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 LCA5LO95447 670 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 SOD2P04179 222 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 CD19P15391 556 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 TNFAIP3P21580 790 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 PLCB3Q01970 1234 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 KRT17Q04695 432 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 SPA17Q15506 151 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 RAB30Q15771 203 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 USP41Q3LFD5 358 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 ZNF394Q53GI3 561 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 ARHGAP17Q68EM7 881 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 ZNF571Q7Z3V5 609 aaPredicted RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 DDX1Q92499 740 aaKnown RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 TWNKQ96RR1 684 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 EIF3CQ99613 913 aaKnown RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 CHP1Q99653 195 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 SYT15Q9BQS2 421 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 PDCL3Q9H2J4 239 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 PUF60Q9UHX1 559 aaKnown RBP14.27□□□□□ -0.13
RPE-208ENST00000436630 PCDHGC3Q9UN70 934 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 LZTS1Q9Y250 596 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 SSX2IPQ9Y2D8 614 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
RPE-208ENST00000436630 PTPRDP23468 1912 aa14.27□□□□□ -0.13
RPE-208ENST00000436630 MYH10P35580 1976 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 F8W810 466 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 CCP110O43303 1012 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 NDUFA10O95299 355 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 RB1P06400 928 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 LINC00271P0C7V0 271 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 GZMAP12544 262 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 PBX3P40426 434 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 KRT83P78385 493 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 FMO1Q01740 532 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 UBE3AQ05086 875 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 ASTE1Q2TB18 679 aaPredicted RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 VARS2Q5ST30 1063 aaKnown RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 ACOT1Q86TX2 421 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 OSTM1Q86WC4 334 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 TMEM173Q86WV6 379 aaPredicted RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 ZNF606Q8WXB4 792 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 HEXIM2Q96MH2 286 aaKnown RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPE-208ENST00000436630 GPR62Q9BZJ7 368 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 ZNF518BQ9C0D4 1074 aa14.26□□□□□ -0.13
RPE-208ENST00000436630 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPE-208ENST00000436630 EPN1Q9Y6I3 576 aaPredicted RBP14.26□□□□□ -0.13
RPE-208ENST00000436630 PLXNA4Q9HCM2 1894 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 C5orf67F2Z3F1 127 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 O00370 1275 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 URODP06132 367 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 PLEKP08567 350 aaPredicted RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 SETSIPP0DME0 302 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 PTPN1P18031 435 aaKnown RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 IGFBP6P24592 240 aaPredicted RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 BRD2P25440 801 aaKnown RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 CTNNB1P35222 781 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 GLUD2P49448 558 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 SLC8A3P57103 927 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 MRPL58Q14197 206 aaKnown RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 CNGA2Q16280 664 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 KIAA1841Q6NSI8 718 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 LCLAT1Q6UWP7 414 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 RAD9BQ6WBX8 426 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 GLYCTKQ8IVS8 523 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 DCP1BQ8IZD4 617 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms