RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 POTECB2RU33 542 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CNPP09543 421 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 BBS2Q9BXC9 721 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 RPN2P04844 631 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CYP21A2P08686 494 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CCDC130P13994 396 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 UQCRBP14927 111 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 PPP2R1BP30154 601 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 CCT8P50990 548 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 NCOA4Q13772 614 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 THOC1Q96FV9 657 aaKnown RBP11.67□□□□□ -0.54
SCN4A-201ENST00000435607 S100A13Q99584 98 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 ECSITQ9BQ95 431 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 KLHL28Q9NXS3 571 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 STK36Q9NRP7 1315 aa11.67□□□□□ -0.54
SCN4A-201ENST00000435607 BIRC5O15392 142 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 NCAM1P13591 858 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 PTPN3P26045 913 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 GNA13Q14344 377 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 DCAF6Q58WW2 860 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 CYFIP2Q96F07 1278 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 OSGEPL1Q9H4B0 414 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 RGS18Q9NS28 235 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 RNF103O00237 685 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 NDUFS2O75306 463 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 SPAG6O75602 509 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 DPCR1Q3MIW9 517 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TIGD7Q6NT04 549 aaPredicted RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 MAPK9P45984 424 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 FAM83EQ2M2I3 478 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 MRNIPQ6NTE8 343 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 MCOLN3Q8TDD5 553 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TMEM63CQ9P1W3 806 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 ADAM30Q9UKF2 790 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 NLRP1Q9C000 1473 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 RAG1P15918 1043 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 GRM4Q14833 912 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 ATL2Q8NHH9 583 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 ZCCHC2Q9C0B9 1178 aaKnown RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TRPM5Q9NZQ8 1165 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 VPS26AO75436 327 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 EYA4O95677 639 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TAF6P49848 677 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 CYTH1Q15438 398 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 CYP4Z2PQ8N1L4 340 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 A0A088AWK7 358 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 SMAPO00193 183 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 ZNF10P21506 573 aaPredicted RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 SLC25A41Q8N5S1 370 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TTLL11Q8NHH1 800 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 CLTBP09497 229 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
SCN4A-201ENST00000435607 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
SCN4A-201ENST00000435607 SYNMO15061 1565 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 XYLBO75191 536 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 CYP24A1Q07973 514 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 VN1R5Q7Z5H4 357 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 FBXO32Q969P5 355 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ADGRE3Q9BY15 652 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 PAK5Q9P286 719 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 COQ6Q9Y2Z9 468 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SAC3D1A6NKF1 404 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ZNF839A8K0R7 811 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SEC24DO94855 1032 aaPredicted RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 MUTP22033 750 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 CLEC16AQ2KHT3 1053 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 EFCAB12Q6NXP0 572 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 NEK10Q6ZWH5 1172 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 CYGBQ8WWM9 190 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 USP6NLQ92738 828 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 ANAPC2Q9UJX6 822 aa11.65□□□□□ -0.54
SCN4A-201ENST00000435607 PNMA8BQ9ULN7 279 aaPredicted RBP11.65□□□□□ -0.54
SCN4A-201ENST00000435607 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms