RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TDRD10Q5VZ19 366 aaKnown RBP17.43■□□□□ 0.38
SMPD4-207ENST00000435455 TRIM67Q6ZTA4 783 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 ADSSL1Q8N142 457 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 ITFG1Q8TB96 612 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 FGF13Q92913 245 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 MMS19Q96T76 1030 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 MKNK1Q9BUB5 465 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 CRISPLD1Q9H336 500 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 C11orf16Q9NQ32 467 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 ASAH2Q9NR71 780 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 CEP72Q9P209 647 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 PCDHB5Q9Y5E4 795 aa17.43■□□□□ 0.38
SMPD4-207ENST00000435455 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 MICAL2O94851 1124 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 C4BPAP04003 597 aaKnown RBP17.42■□□□□ 0.38
SMPD4-207ENST00000435455 WARSP23381 471 aaKnown RBP17.42■□□□□ 0.38
SMPD4-207ENST00000435455 MYL6P60660 151 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 TDGQ13569 410 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 NCOA4Q13772 614 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 WDR72Q3MJ13 1102 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 ZACNQ401N2 412 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 INTS6LQ5JSJ4 861 aaKnown RBP17.42■□□□□ 0.38
SMPD4-207ENST00000435455 PDZD4Q76G19 769 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-207ENST00000435455 LRRTM3Q86VH5 581 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 OSTM1Q86WC4 334 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 KBTBD7Q8WVZ9 684 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 LRFN3Q9BTN0 628 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 XYLT2Q9H1B5 865 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 VRTNQ9H8Y1 702 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
SMPD4-207ENST00000435455 GDE1Q9NZC3 331 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 MAN1B1Q9UKM7 699 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 SLC27A5Q9Y2P5 690 aa17.42■□□□□ 0.38
SMPD4-207ENST00000435455 PSMA7O14818 248 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 TACC1O75410 805 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
SMPD4-207ENST00000435455 ACAT1P24752 427 aaKnown RBP17.41■□□□□ 0.38
SMPD4-207ENST00000435455 EPHA5P54756 1037 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 DLG4P78352 724 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 LRRC63Q05C16 580 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 SLC5A9Q2M3M2 681 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 ZNF699Q32M78 642 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 CLEC17AQ6ZS10 378 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 MTSS1LQ765P7 747 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 SV2AQ7L0J3 742 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 NPAS3Q8IXF0 933 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 TTC9BQ8N6N2 239 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 TAF4BQ92750 862 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-207ENST00000435455 SEPT5Q99719 369 aaPredicted RBP17.41■□□□□ 0.38
SMPD4-207ENST00000435455 SNX25Q9H3E2 840 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 CDH9Q9ULB4 789 aa17.41■□□□□ 0.38
SMPD4-207ENST00000435455 TMEM221A6NGB7 291 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 ANHXE9PGG2 379 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 M0R296 226 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 CLSTN1O94985 981 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 VNN1O95497 513 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 FGF19O95750 216 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-207ENST00000435455 P4HA1P13674 534 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 CCNE1P24864 410 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 FKBP3Q00688 224 aaKnown RBP17.4■□□□□ 0.38
SMPD4-207ENST00000435455 HTR4Q13639 388 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 MAPRE1Q15691 268 aaKnown RBP17.4■□□□□ 0.38
SMPD4-207ENST00000435455 SGSM1Q2NKQ1 1148 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 ZNF667Q5HYK9 610 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 PRSS36Q5K4E3 855 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 C1orf220Q5T0J3 134 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 PSMG2Q969U7 264 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 PKMYT1Q99640 499 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 SYT15Q9BQS2 421 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 DNAJC25Q9H1X3 360 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 TMLHEQ9NVH6 421 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 NXF1Q9UBU9 619 aaKnown RBP17.4■□□□□ 0.38
SMPD4-207ENST00000435455 GTF3C4Q9UKN8 822 aa17.4■□□□□ 0.38
SMPD4-207ENST00000435455 SLC16A3O15427 465 aaKnown RBP17.39■□□□□ 0.37
SMPD4-207ENST00000435455 STX10O60499 249 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 SOAT2O75908 522 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 MYL4P12829 197 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 CEBPBP17676 345 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 GTF2H1P32780 548 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 GNL1P36915 607 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-207ENST00000435455 PIK3CAP42336 1068 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 MCCD1P59942 119 aaPredicted RBP17.39■□□□□ 0.37
SMPD4-207ENST00000435455 MORC3Q14149 939 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 ANKRD40Q6AI12 368 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 C4orf50Q6ZRC1 276 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 BMP8AQ7Z5Y6 402 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 ZC3H3Q8IXZ2 948 aaKnown RBP17.39■□□□□ 0.37
SMPD4-207ENST00000435455 HS6ST3Q8IZP7 471 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 FAM200AQ8TCP9 573 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 TCEAL4Q96EI5 215 aa17.39■□□□□ 0.37
SMPD4-207ENST00000435455 FUBP3Q96I24 572 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms