RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 LXNQ9BS40 222 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 RANBP17Q9H2T7 1088 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 KIAA1586Q9HCI6 787 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 SAR1AQ9NR31 198 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 RNF146Q9NTX7 359 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PAIP2BQ9ULR5 123 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 COMMD3-BMI1R4GMX3 469 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 NOP56O00567 594 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 FCHO1O14526 889 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 MSH4O15457 936 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 LPXNO60711 386 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 T-ENOLP0DO92 83 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 SSTR3P32745 418 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PHBP35232 272 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 SREBF1P36956 1147 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 ARSEP51690 589 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 BFSP1Q12934 665 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 DMP1Q13316 513 aaPredicted RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 RASA2Q15283 850 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 HSP90AA5PQ58FG0 334 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PRAMEF18Q5VWM3 479 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PADI6Q6TGC4 694 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 GADL1Q6ZQY3 521 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 RINLQ6ZS11 566 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 CENPUQ71F23 418 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PYDC1Q8WXC3 89 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 PPP2R3CQ969Q6 453 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 MKL1Q969V6 931 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 AGBL1Q96MI9 1066 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 MIPEPQ99797 713 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 ECSITQ9BQ95 431 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 ZNF408Q9H9D4 720 aa7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 STX18Q9P2W9 335 aaKnown RBP7.79□□□□□ -1.16
SYNPO2-203ENST00000434046 WDR46O15213 610 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ANPEPP15144 967 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 CHRNB2P17787 502 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 MARSP56192 900 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 FOXB2Q5VYV0 432 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SNRNP48Q6IEG0 339 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 C11orf63Q6NUN7 778 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SLC30A10Q6XR72 485 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TTC7BQ86TV6 843 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TRABD2AQ86V40 505 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SESTD1Q86VW0 696 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ZDHHC14Q8IZN3 488 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TCP10LQ8TDR4 215 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 C10orf82Q8WW14 230 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 LPAR1Q92633 364 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 HAS1Q92839 578 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 DCPSQ96C86 337 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SH2D3AQ9BRG2 576 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 RPAP3Q9H6T3 665 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SIX2Q9NPC8 291 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SENP1Q9P0U3 644 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 RPS6KL1Q9Y6S9 549 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ADGRA3Q8IWK6 1321 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 MEI4A8MW99 385 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 C2CD2LO14523 706 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SLC16A3O15427 465 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ASMTLO95671 621 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 INHBAP08476 426 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 MXI1P50539 228 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 GALK1P51570 392 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 PEX3P56589 373 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 CYLC2Q14093 348 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 MYBPC3Q14896 1274 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SLC44A4Q53GD3 710 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 WDR44Q5JSH3 913 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SYCP2LQ5T4T6 812 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 MOXD1Q6UVY6 613 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ANKLE1Q8NAG6 615 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 CYP2W1Q8TAV3 490 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 POMGNT1Q8WZA1 660 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 KAT5Q92993 513 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 FAM111AQ96PZ2 611 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 ACCSQ96QU6 501 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TMEM117Q9H0C3 514 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TAS2R1Q9NYW7 299 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 PSMC3IPQ9P2W1 217 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 SEPT9Q9UHD8 586 aaPredicted RBP7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 TMCO1Q9UM00 188 aa7.78□□□□□ -1.16
SYNPO2-203ENST00000434046 KLRG2A4D1S0 409 aaPredicted RBP7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 HNRNPDLO14979 420 aaKnown RBP7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 ZSCAN5DPP0CG00 497 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 SNHG28P0DPA3 235 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 TNNI1P19237 187 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 BGNP21810 368 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 QARSP47897 775 aaKnown RBP7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 GMPSP49915 693 aaPredicted RBP7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 CDK7P50613 346 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 HMGCS2P54868 508 aa7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 ADARP55265 1226 aaKnown RBP7.77□□□□□ -1.16
SYNPO2-203ENST00000434046 GSTA3Q16772 222 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms