RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MKS1Q9NXB0 559 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SNTG2Q9NY99 539 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TUBGCP4Q9UGJ1 667 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM59LQ9UK28 342 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TNFSF13BQ9Y275 285 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ACACBO00763 2458 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TM4SF1P30408 202 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CPT1AP50416 773 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CBLBQ13191 982 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 C1orf186Q6ZWK4 172 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SH3RF3Q8TEJ3 882 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ANAPC5Q9UJX4 755 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SCN8AQ9UQD0 1980 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PTPRZ1P23471 2315 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 POTEMA6NI47 508 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 H0YJX3 145 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PYGMP11217 842 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CUL2Q13617 745 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CLEC16AQ2KHT3 1053 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DACT2Q5SW24 774 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NAPEPLDQ6IQ20 393 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NCAPG2Q86XI2 1143 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 EPS8L2Q9H6S3 715 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 VEZTQ9HBM0 779 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 BLOC1S4Q9NUP1 217 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 VTI1BQ9UEU0 232 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RSPH14Q9UHP6 348 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CNTN6Q9UQ52 1028 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ANKRD31Q8N7Z5 1873 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SOWAHDA6NJG2 315 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 QSOX1O00391 747 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 AREL1O15033 823 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 AP1G2O75843 785 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GH2P01242 217 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CDH2P19022 906 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RPL9P32969 192 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RENBPP51606 427 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PRMT2P55345 433 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ST3GAL1Q11201 340 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 C4orf50Q6ZRC1 276 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RAVER1Q8IY67 606 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SEPT1Q8WYJ6 367 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KCNK16Q96T55 309 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 QTRT2Q9H974 415 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GPCPD1Q9NPB8 672 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TPX2Q9ULW0 747 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 USP15Q9Y4E8 981 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 FAM169AQ9Y6X4 670 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 SOCS7O14512 581 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 LRMPQ12912 555 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PI16Q6UXB8 463 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC31Q6UY01 552 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 C4orf32Q8N8J7 132 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 IRGQQ8WZA9 623 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KAT2BQ92831 832 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NACA2Q9H009 215 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 UPF3AQ9H1J1 476 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KCTD10Q9H3F6 313 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MYO9AB2RTY4 2548 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 EVPLQ92817 2033 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 A0A1W2PQ67 120 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM114B3SHH9 223 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ANXA9O76027 345 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MDH1P40925 334 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PTPN9P43378 593 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 NCKAP1LP55160 1127 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 KRR1Q13601 381 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GIT2Q14161 759 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TMC3Q7Z5M5 1100 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RAB44Q7Z6P3 723 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PCSK9Q8NBP7 692 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MCUQ8NE86 351 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ASAP3Q8TDY4 903 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DNAJC19Q96DA6 116 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RPF1Q9H9Y2 349 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 EML4Q9HC35 981 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PCDHGC3Q9UN70 934 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PACSIN2Q9UNF0 486 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ARID2Q68CP9 1835 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 DPYSL4O14531 572 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ADCY3O60266 1144 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 HUS1O60921 280 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ASS1P00966 412 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RHOXF2BP0C7M4 288 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 COL6A2P12110 1019 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 MSH2P43246 934 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ABCE1P61221 599 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GUCY1B3Q02153 619 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GRB10Q13322 594 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 CDCA2Q69YH5 1023 aaPredicted RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 FAM92BQ6ZTR7 304 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 GJD3Q8N144 294 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 LINC00116Q8NCU8 138 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 TRPC4APQ8TEL6 797 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 ARHGEF2Q92974 986 aaKnown RBP3.95□□□□□ -1.78
SHPRH-205ENST00000433355 PGBD4Q96DM1 585 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 C18orf8Q96DM3 657 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 RHOXF2Q9BQY4 288 aa3.95□□□□□ -1.78
SHPRH-205ENST00000433355 FTHL17Q9BXU8 183 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms