RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 EXOSC9Q06265 439 aaKnown RBP4.3□□□□□ -1.72
CLK1-204ENST00000432425 MCL1Q07820 350 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 CCDC142Q17RM4 750 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
CLK1-204ENST00000432425 CAMKK1Q8N5S9 505 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 PCSK9Q8NBP7 692 aaKnown RBP4.3□□□□□ -1.72
CLK1-204ENST00000432425 FAM46DQ8NEK8 389 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 STAG1Q8WVM7 1258 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 C1GALT1C1Q96EU7 318 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 ACTRT3Q9BYD9 372 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 CPNE5Q9HCH3 593 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 IL17RBQ9NRM6 502 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 CNNM1Q9NRU3 951 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 KLC4Q9NSK0 619 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 ZNF180Q9UJW8 692 aa4.3□□□□□ -1.72
CLK1-204ENST00000432425 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.3□□□□□ -1.72
CLK1-204ENST00000432425 AP1G1O43747 822 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 URI1O94763 535 aaPredicted RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 GCLCP48506 637 aaPredicted RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 HNRNPMP52272 730 aaKnown RBP eCLIP4.29□□□□□ -1.721e-7■■■■□ 21.9
CLK1-204ENST00000432425 TCF15Q12870 199 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 FAM153CQ494X1 144 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ATAT1Q5SQI0 421 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 TSTD2Q5T7W7 516 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 LAYNQ6UX15 382 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ZNF384Q8TF68 577 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 JPH3Q8WXH2 748 aaPredicted RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 FAM136AQ96C01 138 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 PBKQ96KB5 322 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 CGRRF1Q99675 332 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ALG8Q9BVK2 526 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 RHOBTB2Q9BYZ6 727 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 NMRK2Q9NPI5 230 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ADARB2Q9NS39 739 aaKnown RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 ENTPD2Q9Y5L3 495 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 LINC00473A8K010 186 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ALDH2P05091 517 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 PIM1P11309 404 aaPredicted RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 GPD1P21695 349 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 SOX8P57073 446 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 C21orf58P58505 322 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ZNF267Q14586 743 aaPredicted RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 KHDC1LQ5JSQ8 128 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 RBM20Q5T481 1227 aaKnown RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 EMC10Q5UCC4 262 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 PPP1R32Q7Z5V6 425 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 KLHDC4Q8TBB5 520 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 FKBP10Q96AY3 582 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 PUS7Q96PZ0 661 aaKnown RBP4.29□□□□□ -1.72
CLK1-204ENST00000432425 AMBRA1Q9C0C7 1298 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ARMT1Q9H993 441 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 EHD3Q9NZN3 535 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 PCDHA6Q9UN73 950 aa4.29□□□□□ -1.72
CLK1-204ENST00000432425 ADGRA2Q96PE1 1338 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 GCOM1H8Y6P7 765 aaPredicted RBP4.28□□□□□ -1.72
CLK1-204ENST00000432425 AKAP10O43572 662 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 PROP1O75360 226 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 TTLL1O95922 423 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 RHOP08100 348 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 NR2F6P10588 404 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 HDCP19113 662 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 RAB27AP51159 221 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 EPHB1P54762 984 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 LONRF3Q496Y0 759 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 AMOTQ4VCS5 1084 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 TEDDM1Q5T9Z0 273 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 DIS3LQ8TF46 1054 aaKnown RBP4.28□□□□□ -1.72
CLK1-204ENST00000432425 NTN5Q8WTR8 489 aaPredicted RBP4.28□□□□□ -1.72
CLK1-204ENST00000432425 VOPP1Q96AW1 172 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 LRGUKQ96M69 825 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 AIFM3Q96NN9 605 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 SLC46A1Q96NT5 459 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 HAPLN3Q96S86 360 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 NELL2Q99435 816 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 TIMP4Q99727 224 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 TTYH3Q9C0H2 523 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 SLC12A5Q9H2X9 1139 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 HESX1Q9UBX0 185 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 CPA4Q9UI42 421 aa4.28□□□□□ -1.72
CLK1-204ENST00000432425 WDR27A2RRH5 827 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 UNC5CO95185 931 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 GRPP07492 148 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 ATXN1LP0C7T5 689 aaKnown RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 WT1P19544 449 aaPredicted RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 TOB1P50616 345 aaPredicted RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 SOX10P56693 466 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 LOXL3P58215 753 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 FGL2Q14314 439 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 PLAC9Q5JTB6 97 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 TMEM108Q6UXF1 575 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 DENND1CQ8IV53 801 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 CAMKK2Q96RR4 588 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 RTFDC1Q9BY42 306 aaPredicted RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 ARPP21Q9UBL0 812 aaPredicted RBP4.27□□□□□ -1.73
CLK1-204ENST00000432425 ST3GAL5Q9UNP4 418 aa4.27□□□□□ -1.73
CLK1-204ENST00000432425 PLEKHM1Q9Y4G2 1056 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms