RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PRKCBP05771 671 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 CREB1P16220 341 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 OSBPP22059 807 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 POLD1P28340 1107 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 ANKRD20A2Q5SQ80 823 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 ANKRD20A1Q5TYW2 823 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 AFAP1L2Q8N4X5 818 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 MTBPQ96DY7 904 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 NIF3L1Q9GZT8 377 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 LRRC19Q9H756 370 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 TLK1Q9UKI8 766 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 RGL2O15211 777 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 GPC4O75487 556 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 KRT16P08779 473 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 CAP2P40123 477 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 ACTR2P61160 394 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 SGSM1Q2NKQ1 1148 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPNE4-201ENST00000429747 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 DCLK2Q8N568 766 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 MTMR12Q9C0I1 747 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 PPCSQ9HAB8 311 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 KIF9Q9HAQ2 790 aa13.25□□□□□ -0.29
CPNE4-201ENST00000429747 E2F8A0AVK6 867 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 DNALI1O14645 258 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 UBTFL6P0CB48 400 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 GARTP22102 1010 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 NCALDP61601 193 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MORF4L2Q15014 288 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 NAIF1Q69YI7 327 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 NUF2Q9BZD4 464 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SHCBP1LQ9BZQ2 653 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 CRCPO75575 148 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 CYP1A2P05177 515 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MRPS35P82673 323 aaKnown RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 STX3Q13277 289 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MTFR1Q15390 333 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SLC30A9Q6PML9 568 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 LRRC71Q8N4P6 559 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 FGD4Q96M96 766 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 PDCD2LQ9BRP1 358 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 C17orf75Q9HAS0 396 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 ZC3H11AO75152 810 aaKnown RBP eCLIP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 ITGB5P18084 799 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 ADRA1DP25100 572 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 TYK2P29597 1187 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 GCNT1Q02742 428 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 DBN1Q16643 649 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 PPWD1Q96BP3 646 aaKnown RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SAE1Q9UBE0 346 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SCN11AQ9UI33 1791 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MYL2P10916 166 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 VHLP40337 213 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 TPD52P55327 224 aaPredicted RBP13.24□□□□□ -0.29
CPNE4-201ENST00000429747 CHI3L2Q15782 390 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 ZNF606Q8WXB4 792 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 SEMA4DQ92854 862 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 MIEF2Q96C03 454 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 CENPKQ9BS16 269 aa13.24□□□□□ -0.29
CPNE4-201ENST00000429747 FSCN2O14926 492 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 RPA3P35244 121 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 AP3M2P53677 418 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 ART3Q13508 389 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 HIC1Q14526 733 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 IL31RAQ8NI17 732 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 ZBTB45Q96K62 511 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 R3HDM2Q9Y2K5 976 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 LOC100653049A0A140TA62 436 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 A8MUI8 341 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 F8VP50 259 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 APOL1O14791 398 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 KRT34O76011 436 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 BGNP21810 368 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 VCPP55072 806 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 IRX1P78414 480 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 BIRC2Q13490 618 aa13.23□□□□□ -0.29
CPNE4-201ENST00000429747 PRPF39Q86UA1 669 aaKnown RBP13.23□□□□□ -0.29
CPNE4-201ENST00000429747 LRRC6Q86X45 466 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms