RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 PADI3Q9ULW8 664 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 PTCH2Q9Y6C5 1203 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 COL2A1P02458 1487 aaPredicted RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 GOLGA6BA6NDN3 693 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 RDXP35241 583 aaKnown RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 FAM131BQ86XD5 332 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 CEP41Q9BYV8 373 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 RAD51CO43502 376 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 GAS2O43903 313 aaKnown RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 DR1Q01658 176 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 TAF5Q15542 800 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 SEPT7Q16181 437 aaKnown RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 CRELD2Q6UXH1 353 aaPredicted RBP11.64□□□□□ -0.55
HIPK2-203ENST00000428878 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 DPEP3Q9H4B8 488 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 TNFSF13BQ9Y275 285 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 IPPQ9Y573 584 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 KAT6AQ92794 2004 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 MYH10P35580 1976 aa11.64□□□□□ -0.55
HIPK2-203ENST00000428878 SBF1O95248 1867 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 A6NJR5 290 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 PIAS1O75925 651 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 RALAP11233 206 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 TAF6P49848 677 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 KRT71Q3SY84 523 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 C17orf99Q6UX52 265 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 KCTD17Q8N5Z5 321 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 MFSD14AQ96MC6 490 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 TWNKQ96RR1 684 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 VPS37BQ9H9H4 285 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 O00370 1275 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 LMO2P25791 158 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 ADGRF2Q8IZF7 708 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 OTUD6BQ8N6M0 293 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 PIH1D1Q9NWS0 290 aaKnown RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 E5RJQ4 531 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 FKTNO75072 461 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 SDC4P31431 198 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 ITKQ08881 620 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 PCSK9Q8NBP7 692 aaKnown RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 ST13P5Q8NFI4 369 aaPredicted RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 ERLEC1Q96DZ1 483 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 MLXIPLQ9NP71 852 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 DDX43Q9NXZ2 648 aaKnown RBP11.63□□□□□ -0.55
HIPK2-203ENST00000428878 MORF4L1Q9UBU8 362 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 EVPLQ92817 2033 aa11.63□□□□□ -0.55
HIPK2-203ENST00000428878 TULP2O00295 520 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 SEPT4O43236 478 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 STBD1O95210 358 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 IL18RAPO95256 599 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 TMEM253P0C7T8 217 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MGAT5BQ3V5L5 792 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 CCDC137Q6PK04 289 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 RNF10Q8N5U6 811 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 SHC3Q92529 594 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 NAP1L3Q99457 506 aaPredicted RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 RHOBTB2Q9BYZ6 727 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 SLITRK6Q9H5Y7 841 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 TMEM134Q9H6X4 195 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 COG5Q9UP83 839 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 TLL2Q9Y6L7 1015 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 SMIM28A0A1B0GU29 152 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 POC1B-GALNT4F8VUJ3 575 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 DUSP11O75319 330 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MCF2P10911 925 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 PYGMP11217 842 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MRPS6P82932 125 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 DARS2Q6PI48 645 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MIB1Q86YT6 1006 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 CTAGE3PQ8IX95 158 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 ZNF784Q8NCA9 323 aaPredicted RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 NTPCRQ9BSD7 190 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 PRKAG2Q9UGJ0 569 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 MAD1L1Q9Y6D9 718 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 CITO14578 2027 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 KPNA7A9QM74 516 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 AP1G2O75843 785 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 SAT1P21673 171 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 CTGFP29279 349 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 ABCD1P33897 745 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 TARBP2Q15633 366 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 ABRAQ8N0Z2 381 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 PAAF1Q9BRP4 392 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 STIM2Q9P246 746 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 CPSF3Q9UKF6 684 aaKnown RBP11.62□□□□□ -0.55
HIPK2-203ENST00000428878 BRCA2P51587 3418 aa11.62□□□□□ -0.55
HIPK2-203ENST00000428878 ZNF865P0CJ78 1059 aaPredicted RBP11.61□□□□□ -0.55
HIPK2-203ENST00000428878 RFC1P35251 1148 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms