RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 NCAM2O15394 837 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 HCRTO43612 131 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 KINO60870 393 aaKnown RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 IL18RAPO95256 599 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 ITGB3P05106 788 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 HAPLN1P10915 354 aaPredicted RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 CHRNB1P11230 501 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 STAT6P42226 847 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 ID4P47928 161 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 TFAMQ00059 246 aaKnown RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 E2F4Q16254 413 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 LINC00301Q8NCQ3 95 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 TTC8Q8TAM2 541 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 RMDN1Q96DB5 314 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 PANK4Q9NVE7 773 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 ZSCAN32Q9NX65 697 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 ABI2Q9NYB9 513 aaPredicted RBP16.74■□□□□ 0.27
SEC13-210ENST00000428626 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 L1RE1Q9UN81 338 aa16.74■□□□□ 0.27
SEC13-210ENST00000428626 OBSL1O75147 1896 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 STX6O43752 255 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 HMGA1P17096 107 aaKnown RBP16.73■□□□□ 0.27
SEC13-210ENST00000428626 GARTP22102 1010 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 HOXC13P31276 330 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 HOXD13P35453 343 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 TXLNAP40222 546 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
SEC13-210ENST00000428626 SV2CQ496J9 727 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 SDHAF4Q5VUM1 108 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
SEC13-210ENST00000428626 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 OSTM1Q86WC4 334 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 NT5DC4Q86YG4 428 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 RUBCNQ92622 972 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 E2F7Q96AV8 911 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 PKMYT1Q99640 499 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 C2orf42Q9NWW7 574 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 RBAKQ9NYW8 714 aaPredicted RBP16.73■□□□□ 0.27
SEC13-210ENST00000428626 GTSE1Q9NYZ3 720 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
SEC13-210ENST00000428626 AGAP1Q9UPQ3 857 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 EXOC7Q9UPT5 735 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 PCDHGA2Q9Y5H1 932 aa16.73■□□□□ 0.27
SEC13-210ENST00000428626 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
SEC13-210ENST00000428626 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
SEC13-210ENST00000428626 ACAT1P24752 427 aaKnown RBP16.72■□□□□ 0.27
SEC13-210ENST00000428626 TNK2Q07912 1038 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 THEM5Q8N1Q8 247 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 RIN3Q8TB24 985 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 SPPL2BQ8TCT7 592 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 TASP1Q9H6P5 420 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
SEC13-210ENST00000428626 MYBPHLA2RUH7 354 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 EXTL3O43909 919 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 F11P03951 625 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 WEE1P30291 646 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 CTHP32929 405 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
SEC13-210ENST00000428626 SATB1Q01826 763 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 DMWDQ09019 674 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 MAMSTRQ6ZN01 415 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 Q6ZS52 159 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 YAF2Q8IY57 180 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 C2orf15Q8WU43 125 aaKnown RBP16.71■□□□□ 0.27
SEC13-210ENST00000428626 ATRIPQ8WXE1 791 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 CHFRQ96EP1 664 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 ZNF560Q96MR9 790 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 HINFPQ9BQA5 517 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 EPC1Q9H2F5 836 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 ZSCAN16Q9H4T2 348 aaPredicted RBP16.71■□□□□ 0.27
SEC13-210ENST00000428626 KBTBD4Q9NVX7 518 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
SEC13-210ENST00000428626 SPECC1L-ADORA2AF8WAN1 911 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 SPTLC2O15270 562 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 TADA3O75528 432 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 FGF19O95750 216 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 PNPLA4P41247 253 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 NLRP12P59046 1061 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 SMARCB1Q12824 385 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 BFSP1Q12934 665 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 ALCAMQ13740 583 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 VEPH1Q14D04 833 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 STK38Q15208 465 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 CBWD2Q8IUF1 395 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 DCP1BQ8IZD4 617 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms