RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
CCHCR1-205ENST00000428174 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 HCRTO43612 131 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 NDST1P52848 882 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 ROR1Q01973 937 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 APBA1Q02410 837 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 INCA1Q0VD86 236 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 HYAL1Q12794 435 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 NR1I3Q14994 352 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 GJB7Q6PEY0 223 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 UNC93AQ86WB7 457 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 DCP1BQ8IZD4 617 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 KAT5Q92993 513 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 KREMEN1Q96MU8 473 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 DNAI2Q9GZS0 605 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 PLCB1Q9NQ66 1216 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 CISHQ9NSE2 258 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
CCHCR1-205ENST00000428174 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 CBFA2T2O43439 604 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 ATP2C2O75185 946 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 CILPO75339 1184 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 GLUD1P00367 558 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 C1RP00736 705 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 TPM3P06753 285 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 GTF2F1P35269 517 aaKnown RBP eCLIP13.72□□□□□ -0.219e-12■■■■□ 26
CCHCR1-205ENST00000428174 KLK7P49862 253 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 CLCN4P51793 760 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 MFAP3P55082 362 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 PSMC1P62191 440 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 GPR17Q13304 367 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 KLHDC7AQ5VTJ3 777 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 DPY19L2P1Q6NXN4 242 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 JAKMIP2Q96AA8 810 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 AFF4Q9UHB7 1163 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 PCDHB4Q9Y5E5 795 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 HCFC2Q9Y5Z7 792 aa13.72□□□□□ -0.21
CCHCR1-205ENST00000428174 A0A1W2PQC6 194 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 MYBPHLA2RUH7 354 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 TGM5O43548 720 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 NCK2O43639 380 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ABLIM3O94929 683 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 EPCAMP16422 314 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 RFX1P22670 979 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ELF1P32519 619 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ORC1Q13415 861 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 LILRA6Q6PI73 481 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ACOT1Q86TX2 421 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 LRRTM3Q86VH5 581 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 EFHBQ8N7U6 833 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 UBR7Q8N806 425 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 NEK11Q8NG66 645 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ZNF461Q8TAF7 563 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 CASP10Q92851 521 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 PGLYRP2Q96PD5 576 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 TWNKQ96RR1 684 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 ELOVL4Q9GZR5 314 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 DPEP3Q9H4B8 488 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.21
CCHCR1-205ENST00000428174 TSC2P49815 1807 aa13.71□□□□□ -0.22
CCHCR1-205ENST00000428174 NOL4O94818 638 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 SPATA31D3P0C874 917 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 SRGAP2BP0DMP2 458 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 KRT5P13647 590 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 ATF2P15336 505 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 UCHL3P15374 230 aa13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 ACO1P21399 889 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-205ENST00000428174 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms