RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 DENND1BQ6P3S1 775 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 OTOP2Q7RTS6 562 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 LIMS2Q7Z4I7 341 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 C1orf131Q8NDD1 294 aaKnown RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 ZNF606Q8WXB4 792 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 MRPL9Q9BYD2 267 aaKnown RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 IRX2Q9BZI1 471 aaPredicted RBP12.84□□□□□ -0.35
RFC4-206ENST00000427785 TSGA10Q9BZW7 698 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 ATP8B3O60423 1300 aa12.84□□□□□ -0.35
RFC4-206ENST00000427785 ZBBXA8MT70 800 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 M0QYV0 167 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 PJA2O43164 708 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 KRT86O43790 486 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 MICAL2O94851 1124 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
RFC4-206ENST00000427785 PDGFRBP09619 1106 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 CCDC130P13994 396 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 LMO2P25791 158 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 EPHB4P54760 987 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 SGO2Q562F6 1265 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 TRIM72Q6ZMU5 477 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 H2AFVQ71UI9 128 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 RSPH1Q8WYR4 309 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 ZNF653Q96CK0 615 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 CYFIP2Q96F07 1278 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
RFC4-206ENST00000427785 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
RFC4-206ENST00000427785 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
RFC4-206ENST00000427785 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.36
RFC4-206ENST00000427785 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
RFC4-206ENST00000427785 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 O00370 1275 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 MED7O43513 233 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 BUB1O43683 1085 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 RTN2O75298 545 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 DGKIO75912 1065 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 BAIAP3O94812 1187 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 MOCS3O95396 460 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 FTLP02792 175 aaPredicted RBP12.82□□□□□ -0.36
RFC4-206ENST00000427785 VDRP11473 427 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 UNGP13051 313 aaPredicted RBP12.82□□□□□ -0.36
RFC4-206ENST00000427785 TNNT1P13805 278 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
RFC4-206ENST00000427785 NSFP46459 744 aaKnown RBP12.82□□□□□ -0.36
RFC4-206ENST00000427785 CDR1P51861 262 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 CENPCQ03188 943 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 C10orf76Q5T2E6 689 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 ACAD10Q6JQN1 1059 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 UNC93AQ86WB7 457 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 TXLNBQ8N3L3 684 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 C12orf29Q8N999 325 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 CTNNBL1Q8WYA6 563 aaPredicted RBP12.82□□□□□ -0.36
RFC4-206ENST00000427785 SUSD3Q96L08 255 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 SYT15Q9BQS2 421 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 C11orf70Q9BRQ4 267 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 THAP2Q9H0W7 228 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 SALL4Q9UJQ4 1053 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 PCDHGC3Q9UN70 934 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 STXBP5LQ9Y2K9 1186 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
RFC4-206ENST00000427785 ZNF638Q14966 1978 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 M0QZQ0 153 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 NRP1O14786 923 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 FANCGO15287 622 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 KIF5CO60282 957 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 EFCAB14O75071 495 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ATP2C2O75185 946 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 LSM8O95777 96 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 TMEM253P0C7T8 217 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ADORA2BP29275 332 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 GNG11P61952 73 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 C2CD6Q53TS8 623 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 MDH1BQ5I0G3 518 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 PPP1R26Q5T8A7 1209 aaPredicted RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 COL13A1Q5TAT6 717 aaPredicted RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 KIAA0319Q5VV43 1072 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 SYT10Q6XYQ8 523 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 MMS22LQ6ZRQ5 1243 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ZNF662Q6ZS27 426 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ZNF365Q70YC5 407 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 MON1BQ7L1V2 547 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 TMEM173Q86WV6 379 aaPredicted RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 TMEM86AQ8N2M4 240 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms