RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 ZBED6P86452 979 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 SMC1AQ14683 1233 aaKnown RBP16.44■□□□□ 0.22
COL11A1-204ENST00000427239 PSMD5Q16401 504 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 TMEM270Q6UE05 265 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 FAM71AQ8IYT1 594 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
COL11A1-204ENST00000427239 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 CPLX3Q8WVH0 158 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 TMEM176AQ96HP8 235 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 ENTPD7Q9NQZ7 604 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 FNIP2Q9P278 1114 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 CDH9Q9ULB4 789 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 KIAA1671Q9BY89 1806 aa16.44■□□□□ 0.22
COL11A1-204ENST00000427239 F8VZ95 297 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 C2CD2LO14523 706 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 LPXNO60711 386 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 GYPCP04921 128 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 PDGFRBP09619 1106 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 CCDC172P0C7W6 258 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 KRT5P13647 590 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 DNAJB1P25685 340 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 STAT1P42224 750 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 BPIFB4P59827 614 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 TSPY1Q01534 308 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 CAMK1Q14012 370 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 PTPN14Q15678 1187 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 SLC8B1Q6J4K2 584 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 OSTM1Q86WC4 334 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 WHAMMQ8TF30 809 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 BAP1Q92560 729 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 RTP3Q9BQQ7 232 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 GPR88Q9GZN0 384 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 RXFP1Q9HBX9 757 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 AJAP1Q9UKB5 411 aaPredicted RBP16.43■□□□□ 0.22
COL11A1-204ENST00000427239 NLRC5Q86WI3 1866 aa16.43■□□□□ 0.22
COL11A1-204ENST00000427239 PAEPP09466 180 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 CASP14P31944 242 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 USP8P40818 1118 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 RAD23BP54727 409 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 TBX2Q13207 712 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 MAPRE1Q15691 268 aaKnown RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 PTPROQ16827 1216 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 ZNF394Q53GI3 561 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 PRSS55Q6UWB4 352 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 DCP1BQ8IZD4 617 aaKnown RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 IMPACTQ9P2X3 320 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 FSCN2O14926 492 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 PTPN1P18031 435 aaKnown RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 SOX5P35711 763 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 ZNF132P52740 706 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 PTK2Q05397 1052 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 GPR153Q6NV75 609 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 RBBP8NLQ8NC74 664 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 B3GALNT2Q8NCR0 500 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
COL11A1-204ENST00000427239 SYT15Q9BQS2 421 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 CLSTN3Q9BQT9 956 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 EMILIN2Q9BXX0 1053 aa16.42■□□□□ 0.22
COL11A1-204ENST00000427239 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
COL11A1-204ENST00000427239 CLCN1P35523 988 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 KRT9P35527 623 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL11A1-204ENST00000427239 GPR17Q13304 367 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
COL11A1-204ENST00000427239 FAM171BQ6P995 826 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 CNGA4Q8IV77 575 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 OR8K1Q8NGG5 319 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 OR10T2Q8NGX3 314 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 AUTS2Q8WXX7 1259 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 TWNKQ96RR1 684 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 ELOVL4Q9GZR5 314 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 ZCWPW1Q9H0M4 648 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 AIPL1Q9NZN9 384 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 CDY1Q9Y6F8 540 aa16.41■□□□□ 0.22
COL11A1-204ENST00000427239 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 C2orf71A6NGG8 1288 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 EPOPA6NHQ4 379 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 LRRC53A6NM62 1247 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 SOX1O00570 391 aaPredicted RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 CYP26A1O43174 497 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 C1RP00736 705 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 CNPP09543 421 aaKnown RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 OR1D2P34982 312 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 CA8P35219 290 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 NDUFV1P49821 464 aa16.4■□□□□ 0.22
COL11A1-204ENST00000427239 NFE2Q16621 373 aaPredicted RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
COL11A1-204ENST00000427239 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms