RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 GRIK1P39086 918 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 SERPINB4P48594 390 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 MFSD14CQ5VZR4 134 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 CGRRF1Q99675 332 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 PXMP2Q9NR77 195 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 NEMP1O14524 444 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 KRT4P19013 534 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 PTENP60484 403 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 FAXCQ5TGI0 409 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 SAMD3Q8N6K7 520 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 RMDN1Q96DB5 314 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 MANSC1Q9H8J5 431 aa20.6■□□□□ 0.89
HCG18-235ENST00000426882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.6■□□□□ 0.892e-25■□□□□ 10.5
HCG18-235ENST00000426882 AP3B1O00203 1094 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 USP10Q14694 798 aaKnown RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 UGP2Q16851 508 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 SPATA2LQ8IUW3 424 aaPredicted RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 WDR70Q9NW82 654 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 HACD3Q9P035 362 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 MTO1Q9Y2Z2 717 aaKnown RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 TRIM49D1C9J1S8 452 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 F8W8V4 182 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 IGF2BP3O00425 579 aaKnown RBP eCLIP20.59■□□□□ 0.89
HCG18-235ENST00000426882 CLCN3P51790 818 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 SOX10P56693 466 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 TMEM259Q4ZIN3 620 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 NRBF2Q96F24 287 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.59■□□□□ 0.89
HCG18-235ENST00000426882 DDX3XO00571 662 aaKnown RBP eCLIP20.59■□□□□ 0.893e-7■■□□□ 12.1
HCG18-235ENST00000426882 C6orf222P0C671 652 aaPredicted RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 TTC39BQ5VTQ0 682 aaPredicted RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 C11orf63Q6NUN7 778 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 DDIASQ8IXT1 998 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 ICA1LQ8NDH6 482 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 SLC7A14Q8TBB6 771 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 EML1O00423 815 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 NPTXRO95502 500 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 SPRP35270 261 aaPredicted RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 RECQLP46063 649 aaPredicted RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 LAMC2Q13753 1193 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 TFDP3Q5H9I0 405 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 EFHC1Q5JVL4 640 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 APOBEC3HQ6NTF7 200 aaKnown RBP20.59■□□□□ 0.89
HCG18-235ENST00000426882 ASAP3Q8TDY4 903 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 KRT35Q92764 455 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 SIK3Q9Y2K2 1263 aa20.59■□□□□ 0.89
HCG18-235ENST00000426882 PJA2O43164 708 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 GNL1P36915 607 aaPredicted RBP20.58■□□□□ 0.89
HCG18-235ENST00000426882 DNAL1Q4LDG9 190 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 MROH9Q5TGP6 573 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 CREG2Q8IUH2 290 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 ATPAF2Q8N5M1 289 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 CXorf38Q8TB03 319 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 RMDN2Q96LZ7 410 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 FRMD8Q9BZ67 464 aaPredicted RBP20.58■□□□□ 0.89
HCG18-235ENST00000426882 A0A0U1RQJ8 604 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 GRIK5Q16478 980 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 GLIS3Q8NEA6 775 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 SPDYE1Q8NFV5 336 aaPredicted RBP20.58■□□□□ 0.89
HCG18-235ENST00000426882 TATDN2Q93075 761 aa20.58■□□□□ 0.89
HCG18-235ENST00000426882 POLBP06746 335 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 MAPRE2Q15555 327 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 SV2CQ496J9 727 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 C3orf20Q8ND61 904 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 E2F7Q96AV8 911 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 E2F8A0AVK6 867 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 KLRC4O43908 158 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 CNPY4Q8N129 248 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 CERKQ8TCT0 537 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 PTPRN2Q92932 1015 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 TJP2Q9UDY2 1190 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 GRID1Q9ULK0 1009 aa20.58■□□□□ 0.88
HCG18-235ENST00000426882 B2RBV5 119 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 E2F6O75461 281 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 MAP3K6O95382 1288 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 NFKBIAP25963 317 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 IMPG1Q17R60 797 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 CLEC16AQ2KHT3 1053 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 CAPRIN2Q6IMN6 1127 aaKnown RBP20.57■□□□□ 0.88
HCG18-235ENST00000426882 TASP1Q9H6P5 420 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 ERVK-9P63128 1117 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 OTUD4Q01804 1114 aaKnown RBP20.57■□□□□ 0.88
HCG18-235ENST00000426882 ANGPTL8Q6UXH0 198 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 LRRC6Q86X45 466 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 GPRC5AQ8NFJ5 357 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 EGFL8Q99944 293 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 SEMA4AQ9H3S1 761 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 VIL1P09327 827 aaKnown RBP20.57■□□□□ 0.88
HCG18-235ENST00000426882 MPZL3Q6UWV2 235 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 ANKRD13AQ8IZ07 590 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 THTPAQ9BU02 230 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 DPP3Q9NY33 737 aa20.57■□□□□ 0.88
HCG18-235ENST00000426882 ZFPM1Q8IX07 1006 aa20.56■□□□□ 0.88
HCG18-235ENST00000426882 ARMC2Q8NEN0 867 aa20.56■□□□□ 0.88
HCG18-235ENST00000426882 EXD1Q8NHP7 514 aa20.56■□□□□ 0.88
HCG18-235ENST00000426882 C20orf96Q9NUD7 363 aaPredicted RBP20.56■□□□□ 0.88
HCG18-235ENST00000426882 TSR3Q9UJK0 312 aaKnown RBP20.56■□□□□ 0.88
HCG18-235ENST00000426882 ZBTB39O15060 712 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms