RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 UBALD2Q8IYN6 164 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 LEMD2Q8NC56 503 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 ITFG1Q8TB96 612 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 SPPL2BQ8TCT7 592 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 KBTBD7Q8WVZ9 684 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 ZNF512Q96ME7 567 aaPredicted RBP18.48■□□□□ 0.55
LMCD1-204ENST00000426878 PKMYT1Q99640 499 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 ASB3Q9Y575 518 aa18.48■□□□□ 0.55
LMCD1-204ENST00000426878 CETN3O15182 167 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 VNN1O95497 513 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 WARSP23381 471 aaKnown RBP18.47■□□□□ 0.55
LMCD1-204ENST00000426878 EPHB3P54753 998 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 LRRC63Q05C16 580 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 BIRC3Q13489 604 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 STIM1Q13586 685 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 NCOA4Q13772 614 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 MORC3Q14149 939 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 WDR72Q3MJ13 1102 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 INTS6LQ5JSJ4 861 aaKnown RBP18.47■□□□□ 0.55
LMCD1-204ENST00000426878 TMEM31Q5JXX7 168 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 FOXR2Q6PJQ5 311 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 FGF13Q92913 245 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 DHTKD1Q96HY7 919 aaPredicted RBP18.47■□□□□ 0.55
LMCD1-204ENST00000426878 TSG101Q99816 390 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 DNAJC25Q9H1X3 360 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 KCNK12Q9HB15 430 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 SLC27A5Q9Y2P5 690 aa18.47■□□□□ 0.55
LMCD1-204ENST00000426878 MRPS23Q9Y3D9 190 aaKnown RBP18.47■□□□□ 0.55
LMCD1-204ENST00000426878 TECTAO75443 2155 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 ANHXE9PGG2 379 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 ZNF197O14709 1029 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 PSMA7O14818 248 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 ASGR2P07307 311 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 KRT13P13646 458 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 BMP6P22004 513 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 FKBP3Q00688 224 aaKnown RBP18.46■□□□□ 0.55
LMCD1-204ENST00000426878 MTMR3Q13615 1198 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 PRSS36Q5K4E3 855 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 ANKRD40Q6AI12 368 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 TRIM67Q6ZTA4 783 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 SV2AQ7L0J3 742 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 TTC9BQ8N6N2 239 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 TAF4BQ92750 862 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 IPO9Q96P70 1041 aaKnown RBP18.46■□□□□ 0.55
LMCD1-204ENST00000426878 MMS19Q96T76 1030 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 CORO1BQ9BR76 489 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 ABCB6Q9NP58 842 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 TMLHEQ9NVH6 421 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 GDE1Q9NZC3 331 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 PCDHB5Q9Y5E4 795 aa18.46■□□□□ 0.55
LMCD1-204ENST00000426878 HAPLN1P10915 354 aaPredicted RBP18.45■□□□□ 0.54
LMCD1-204ENST00000426878 CCNE1P24864 410 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 GTF2H1P32780 548 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 PMS1P54277 932 aaKnown RBP18.45■□□□□ 0.54
LMCD1-204ENST00000426878 TNNC1P63316 161 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 SIGLEC14Q08ET2 396 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 TDGQ13569 410 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 SLC5A9Q2M3M2 681 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 CYP4A22Q5TCH4 519 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 FAM171BQ6P995 826 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 NPAS3Q8IXF0 933 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 PSMG2Q969U7 264 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 CDH9Q9ULB4 789 aa18.45■□□□□ 0.54
LMCD1-204ENST00000426878 PRR33A8MZF0 331 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 PPP1R3GB7ZBB8 358 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 SLC16A3O15427 465 aaKnown RBP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 EPB41P11171 864 aaKnown RBP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 CD44P16070 742 aaKnown RBP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ACAT1P24752 427 aaKnown RBP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 LMO2P25791 158 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ZNF699Q32M78 642 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 CFAP221Q4G0U5 840 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ISM2Q6H9L7 571 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 PDZD4Q76G19 769 aaPredicted RBP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ITIH5Q86UX2 942 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 TRIML1Q8N9V2 468 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 FUBP3Q96I24 572 aaKnown RBP eCLIP18.44■□□□□ 0.54
LMCD1-204ENST00000426878 LRFN3Q9BTN0 628 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ASAH2Q9NR71 780 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 KIAA1468Q9P260 1216 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 GTF3C4Q9UKN8 822 aa18.44■□□□□ 0.54
LMCD1-204ENST00000426878 ASS1P00966 412 aaKnown RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 GNL1P36915 607 aaPredicted RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 CCR2P41597 374 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 PPP3CAQ08209 521 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 HTR4Q13639 388 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 MAPRE1Q15691 268 aaKnown RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 MGAT5BQ3V5L5 792 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 ZNF667Q5HYK9 610 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 BMP8AQ7Z5Y6 402 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 DNAJB7Q7Z6W7 309 aaPredicted RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 TMC8Q8IU68 726 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 HS6ST3Q8IZP7 471 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 EEF2KMTQ96G04 330 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 SEPT5Q99719 369 aaPredicted RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 SYT15Q9BQS2 421 aa18.43■□□□□ 0.54
LMCD1-204ENST00000426878 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
LMCD1-204ENST00000426878 SNX25Q9H3E2 840 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms