RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PIGRP01833 764 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ADRB2P07550 413 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TNFSF9P41273 254 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TOB1P50616 345 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CYP4F8P98187 520 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MYL7Q01449 175 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PSMD2Q13200 908 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CCINQ13939 588 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GAS6Q14393 721 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 Q6ZS52 159 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KCNK18Q7Z418 384 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MAB21L3Q8N8X9 362 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 KCNN1Q92952 543 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ABI2Q9NYB9 513 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 AGO2Q9UKV8 859 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PIRO00625 290 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 IFNAR2P48551 515 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TMEM196Q5HYL7 178 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 STXBP5Q5T5C0 1151 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 RNF43Q68DV7 783 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TXNDC11Q6PKC3 985 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 P2RY13Q9BPV8 354 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LPIN3Q9BQK8 851 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MMTAG2Q9BU76 263 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GDF9O60383 454 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SOAT2O75908 522 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EPN2O95208 641 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 RDXP35241 583 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ACOT2P49753 483 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GALK1P51570 392 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TNK2Q07912 1038 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 IL17AQ16552 155 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 STPG1Q5TH74 334 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MON1AQ86VX9 555 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TTC16Q8NEE8 873 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZC3H10Q96K80 434 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 PNMA5Q96PV4 448 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EBF3Q9H4W6 596 aa13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NPHP3-ACAD11A0A0J9YXS1 232 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NRG2O14511 850 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 EXTL3O43909 919 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 APBB3O95704 486 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GBP1P32455 592 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 DDIT3P35638 169 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TXLNAP40222 546 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 MPLP40238 635 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 LHX1P48742 406 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 NLRP12P59046 1061 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 GTF2BQ00403 316 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ST3GAL1Q11201 340 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SF3A2Q15428 464 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 WSCD1Q658N2 575 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SPATA2LQ8IUW3 424 aaPredicted RBP13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TMEM86AQ8N2M4 240 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CD101Q93033 1021 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 HVCN1Q96D96 273 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 FAM83CQ9BQN1 747 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 CCSER1Q9C0I3 900 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 TMEM206Q9H813 350 aa13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 UPF2Q9HAU5 1272 aaKnown RBP13.21□□□□□ -0.29
HLA-DQB3-203ENST00000425319 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MEFVO15553 781 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RNF40O75150 1001 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 VNN2O95498 520 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CAVIN2O95810 425 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 F11P03951 625 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CKMP06732 381 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PCSK1P29120 753 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DGKEP52429 567 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms