RNA–Protein interactions for RNA: ENST00000424645.5

NCSTN-204, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-204ENST00000424645 LMO3Q8TAP4 145 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 SEMA4DQ92854 862 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.67
NCSTN-204ENST00000424645 ZCWPW1Q9H0M4 648 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 HSD3B7Q9H2F3 369 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 ABCB6Q9NP58 842 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 ZDHHC7Q9NXF8 308 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 KIAA1257Q9ULG3 409 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 BARX2Q9UMQ3 279 aaPredicted RBP10.89□□□□□ -0.67
NCSTN-204ENST00000424645 HCFC2Q9Y5Z7 792 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 CHD9Q3L8U1 2897 aa10.89□□□□□ -0.67
NCSTN-204ENST00000424645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 LGALS16A8MUM7 142 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 A8MXQ7 604 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 TGM5O43548 720 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 TPM3P06753 285 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 HNRNPA1P09651 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 ASPAP45381 313 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 COPB1P53618 953 aaKnown RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 MFAP3P55082 362 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 ROR1Q01973 937 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 ITIH3Q06033 890 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 PLD1Q13393 1074 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 CUL2Q13617 745 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 FAM171BQ6P995 826 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 C4orf50Q6ZRC1 276 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 RBM23Q86U06 439 aaKnown RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 FMNL3Q8IVF7 1028 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 TCEAL8Q8IYN2 117 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 OR6B3Q8NGW1 331 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 KBTBD7Q8WVZ9 684 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 AUTS2Q8WXX7 1259 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 HLA-CQ95604 372 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 NT5C1AQ9BXI3 368 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 PLCB1Q9NQ66 1216 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 APEX2Q9UBZ4 518 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 FBXW11Q9UKB1 542 aa10.88□□□□□ -0.67
NCSTN-204ENST00000424645 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 LAMA2P24043 3122 aaKnown RBP10.88□□□□□ -0.67
NCSTN-204ENST00000424645 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
NCSTN-204ENST00000424645 PER2O15055 1255 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 CILPO75339 1184 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 SERPINC1P01008 464 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 CPB1P15086 417 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 PON1P27169 355 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 CFAP221Q4G0U5 840 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 KREMEN2Q8NCW0 462 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 IQCDQ96DY2 449 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 ERGIC2Q96RQ1 377 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 VPS16Q9H269 839 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 SFXN1Q9H9B4 322 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 APOBEC3GQ9HC16 384 aaKnown RBP10.87□□□□□ -0.67
NCSTN-204ENST00000424645 FAM50BQ9Y247 325 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 ASB3Q9Y575 518 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 PCDHB5Q9Y5E4 795 aa10.87□□□□□ -0.67
NCSTN-204ENST00000424645 ATP8B3O60423 1300 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 SCN1AP35498 2009 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 A0A1W2PQC6 194 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 ZMYND10O75800 440 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 PAEPP09466 180 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-204ENST00000424645 PTPN1P18031 435 aaKnown RBP10.86□□□□□ -0.67
NCSTN-204ENST00000424645 RPL17P18621 184 aaKnown RBP10.86□□□□□ -0.67
NCSTN-204ENST00000424645 MAGEA11P43364 429 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 UBXN1Q04323 297 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 STILQ15468 1287 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 HSP90AA4PQ58FG1 418 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 SCARA3Q6AZY7 606 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 SPOPLQ6IQ16 392 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 CES5AQ6NT32 575 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 VSTM1Q6UX27 236 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
NCSTN-204ENST00000424645 APTXQ7Z2E3 356 aaKnown RBP10.86□□□□□ -0.67
NCSTN-204ENST00000424645 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 PALB2Q86YC2 1186 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 TMEM130Q8N3G9 435 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 B3GALNT2Q8NCR0 500 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 OR10T2Q8NGX3 314 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 TATDN2Q93075 761 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 PKMYT1Q99640 499 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
NCSTN-204ENST00000424645 MRPL45Q9BRJ2 306 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms