RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 SOD2P04179 222 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 VDRP11473 427 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ANXA13P27216 316 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
ABCA1-203ENST00000423487 PLCB3Q01970 1234 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
ABCA1-203ENST00000423487 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ORC1Q13415 861 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 RAB30Q15771 203 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 VARS2Q5ST30 1063 aaKnown RBP16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ZNF280DQ6N043 979 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ACOT1Q86TX2 421 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 TMEM139Q8IV31 216 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 CCDC42Q96M95 316 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ACBD6Q9BR61 282 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 HERC2P3Q9BVR0 1158 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 DEF6Q9H4E7 631 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 ACP6Q9NPH0 428 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 MSRAQ9UJ68 235 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 NOCTQ9UK39 431 aaKnown RBP16.98■□□□□ 0.31
ABCA1-203ENST00000423487 CDH9Q9ULB4 789 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
ABCA1-203ENST00000423487 H7C4K7 107 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 MED7O43513 233 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 CA3P07451 260 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 MYOGP15173 224 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 CTNNB1P35222 781 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 EIF4A3P38919 411 aaKnown RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 CDR2Q01850 454 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 MRPL58Q14197 206 aaKnown RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 KIAA1841Q6NSI8 718 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 ANKS3Q6ZW76 656 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 ZNF571Q7Z3V5 609 aaPredicted RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 CCDC170Q8IYT3 715 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 ZNF606Q8WXB4 792 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 TRIM44Q96DX7 344 aaPredicted RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 AGPAT1Q99943 283 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 SYT15Q9BQS2 421 aa16.97■□□□□ 0.31
ABCA1-203ENST00000423487 OXCT2Q9BYC2 517 aaPredicted RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 NHEJ1Q9H9Q4 299 aaPredicted RBP16.97■□□□□ 0.31
ABCA1-203ENST00000423487 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 HCRTO43612 131 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 RB1P06400 928 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 PLEKP08567 350 aaPredicted RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 PTPN1P18031 435 aaKnown RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 TNFAIP3P21580 790 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 ACAT1P24752 427 aaKnown RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 CCZ1BP86790 482 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.31
ABCA1-203ENST00000423487 TSPY1Q01534 308 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 STILQ15468 1287 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 RTP2Q5QGT7 225 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 TAS1R1Q7RTX1 841 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 KLHL23Q8NBE8 558 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 B3GALNT2Q8NCR0 500 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 SLC20A1Q8WUM9 679 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 RTP3Q9BQQ7 232 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 VN1R3Q9BXE9 311 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 PBX4Q9BYU1 374 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 DPEP3Q9H4B8 488 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 CHST7Q9NS84 486 aa16.96■□□□□ 0.31
ABCA1-203ENST00000423487 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 OR6C75A6NL08 312 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 AKR1B10O60218 316 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 GLUD2P49448 558 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 PSMC1P62191 440 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 HS1BP3Q53T59 392 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 INTS6LQ5JSJ4 861 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 TAF3Q5VWG9 929 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 GPR65Q8IYL9 337 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 TFAP2BQ92481 460 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 DDX1Q92499 740 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 B3GALT6Q96L58 329 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 TGS1Q96RS0 853 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 C17orf80Q9BSJ5 609 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 SYT11Q9BT88 431 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 KCNF1Q9H3M0 494 aa16.96■□□□□ 0.3
ABCA1-203ENST00000423487 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.3
ABCA1-203ENST00000423487 C5orf67F2Z3F1 127 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 CALCAP01258 141 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 URODP06132 367 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 MMEP08473 750 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 KIF11P52732 1056 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 DSG1Q02413 1049 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 MAPRE1Q15691 268 aaKnown RBP16.95■□□□□ 0.3
ABCA1-203ENST00000423487 CNGA2Q16280 664 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 ARHGAP17Q68EM7 881 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 CHRDL2Q6WN34 429 aa16.95■□□□□ 0.3
ABCA1-203ENST00000423487 GLYCTKQ8IVS8 523 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms