RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ITKQ08881 620 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 CDSNQ15517 529 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 PLEKHG6Q3KR16 790 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SPATS1Q496A3 300 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 GORABQ5T7V8 394 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SPRED1Q7Z699 444 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 CNTROBQ8N137 903 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 RABGGTAQ92696 567 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 DCPSQ96C86 337 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 NEUROD6Q96NK8 337 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 METTL14Q9HCE5 456 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 TRHDEQ9UKU6 1024 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 TCAF1Q9Y4C2 921 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SLC30A1Q9Y6M5 507 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SHTN1A0MZ66 631 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 MAFGO15525 162 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 JUNP05412 331 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 UQCRFS1P1P0C7P4 283 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 RPS19P39019 145 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SELENOPP49908 381 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 EXOSC10Q01780 885 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 DLGAP5Q15398 846 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 CCDC158Q5M9N0 1113 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 MFSD14BQ5SR56 506 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SPTY2D1Q68D10 685 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 UNC5BQ8IZJ1 945 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 D2HGDHQ8N465 521 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 CERS5Q8N5B7 392 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 PPM1NQ8N819 430 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 DVL3Q92997 716 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 LPPQ93052 612 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 KIF1BPQ96EK5 621 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 ZBED3Q96IU2 234 aaPredicted RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 MXD3Q9BW11 206 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 EPC1Q9H2F5 836 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 MYOZ2Q9NPC6 264 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 FPGT-TNNI3KV9GXZ4 949 aa2.99□□□□□ -1.93
VPS13A-208ENST00000423463 PDS5AQ29RF7 1337 aaKnown RBP2.99□□□□□ -1.93
VPS13A-208ENST00000423463 SCN4AP35499 1836 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 TIAM2Q8IVF5 1701 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 MAST3O60307 1309 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 PASKQ96RG2 1323 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 SALL1Q9NSC2 1324 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 A0A1W2PR48 441 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 MUSKO15146 869 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 NRP2O60462 931 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 ADRB1P08588 477 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 INSRRP14616 1297 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CTSSP25774 331 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 ADORA1P30542 326 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 PHKA1P46020 1223 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CHAF1AQ13111 956 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 UBE3CQ15386 1083 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 ELAVL1Q15717 326 aaKnown RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 KCNK18Q7Z418 384 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 XYLT1Q86Y38 959 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CLASRPQ8N2M8 674 aaKnown RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CBARPQ8N350 705 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 ZGPATQ8N5A5 531 aaKnown RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 OR5M3Q8NGP4 307 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 SH3RF3Q8TEJ3 882 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 OSBPL6Q9BZF3 934 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 DCTPP1Q9H773 170 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 EXOC6BQ9Y2D4 811 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CAPN14A8MX76 684 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 WNT10BO00744 389 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 LDHCP07864 332 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 MYBL2P10244 700 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 ADSLP30566 484 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 GPR15P49685 360 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 NPEPPSP55786 919 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 NRG3P56975 720 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 KLF1Q13351 362 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 MAN2A1Q16706 1144 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 GAGE13Q4V321 117 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 BRDTQ58F21 947 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 Q6ZSN1 163 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 POLNQ7Z5Q5 900 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 GGNQ86UU5 652 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 SGMS1Q86VZ5 419 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 TTC9BQ8N6N2 239 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 AUTS2Q8WXX7 1259 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 TCF25Q9BQ70 676 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 GLIS2Q9BZE0 524 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 PUS7LQ9H0K6 701 aaKnown RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 WNT8AQ9H1J5 351 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 HMG20BQ9P0W2 317 aa2.98□□□□□ -1.93
VPS13A-208ENST00000423463 CNOT11Q9UKZ1 510 aaKnown RBP2.98□□□□□ -1.93
VPS13A-208ENST00000423463 GABRDO14764 452 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 ITGA10O75578 1167 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 IFIT2P09913 472 aaKnown RBP2.97□□□□□ -1.93
VPS13A-208ENST00000423463 HK1P19367 917 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 RBM5P52756 815 aaKnown RBP eCLIP2.97□□□□□ -1.93
VPS13A-208ENST00000423463 DUSP2Q05923 314 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 PUM1Q14671 1186 aaKnown RBP eCLIP2.97□□□□□ -1.93
VPS13A-208ENST00000423463 ADRM1Q16186 407 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 MUM1Q2TAK8 710 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 TTC39AQ5SRH9 613 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 PGM2L1Q6PCE3 622 aa2.97□□□□□ -1.93
VPS13A-208ENST00000423463 TMED8Q6PL24 325 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms