RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 GSTA1P08263 222 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 GSTA2P09210 222 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 KLRC2P26717 231 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 CD52P31358 61 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TNFSF9P41273 254 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ARHGAP1Q07960 439 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 GRB14Q14449 540 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF792Q3KQV3 632 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ARHGAP15Q53QZ3 475 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 FIGNQ5HY92 759 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 C6orf163Q5TEZ5 329 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 HEATR6Q6AI08 1181 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ZC3H18Q86VM9 953 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DNAAF5Q86Y56 855 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 BRSK2Q8IWQ3 736 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RUNDC3BQ96NL0 473 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 MCEEQ96PE7 176 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 PGAP2Q9UHJ9 254 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DFFAO00273 331 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RTN2O75298 545 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RGS20O76081 388 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 ACAT1P24752 427 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 RTP1P59025 263 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 AP1B1Q10567 949 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 FBXO32Q969P5 355 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 FAF2Q96CS3 445 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 IFT43Q96FT9 208 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 MS4A4AQ96JQ5 239 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 DNAJC7Q99615 494 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 CELF4Q9BZC1 486 aaKnown RBP10.26□□□□□ -0.77
CMSS1-201ENST00000421999 IGFLR1Q9H665 355 aa10.26□□□□□ -0.77
CMSS1-201ENST00000421999 SEPT4O43236 478 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 MYBL1P10243 752 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 SCNN1GP51170 649 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 C2orf54Q08AI8 447 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 KCNA10Q16322 511 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 AFAP1L2Q8N4X5 818 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 RNF10Q8N5U6 811 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ANKS4BQ8N8V4 417 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 LRRC15Q8TF66 581 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 RIN2Q8WYP3 895 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 PABPC5Q96DU9 382 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 MRPL9Q9BYD2 267 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 CDT1Q9H211 546 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ARHGAP20Q9P2F6 1191 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 LAMB2P55268 1798 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 GTPBP10A4D1E9 387 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 PSMD6Q15008 389 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 NAB2Q15742 525 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 BMT2Q1RMZ1 405 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 DAW1Q8N136 415 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 C1orf131Q8NDD1 294 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ACO2Q99798 780 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 PTPN18Q99952 460 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 RNF14Q9UBS8 474 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ATP8A1Q9Y2Q0 1164 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 F8VZ95 297 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 SNAI1O95863 264 aaPredicted RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ACADSBP45954 432 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 HARS2P49590 506 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF131P52739 623 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
CMSS1-201ENST00000421999 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 JADE1Q6IE81 842 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 PID1Q7Z2X4 250 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ARHGEF19Q8IW93 802 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 TTC30BQ8N4P2 665 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 KAT5Q92993 513 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 PLCD4Q9BRC7 762 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 KLC2Q9H0B6 622 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 GOLPH3Q9H4A6 298 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 TIAM2Q8IVF5 1701 aa10.25□□□□□ -0.77
CMSS1-201ENST00000421999 ARF4P18085 180 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-201ENST00000421999 SERPINB6P35237 376 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 RPL10AP62906 217 aaKnown RBP10.24□□□□□ -0.77
CMSS1-201ENST00000421999 CCDC6Q16204 474 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 IL31Q6EBC2 164 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 RABEP2Q9H5N1 569 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 DDIT4Q9NX09 232 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 TNFSF13BQ9Y275 285 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 RREB1Q92766 1687 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 SCN9AQ15858 1988 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 I3L4J1 428 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 EPHB6O15197 1021 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 AXLP30530 894 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 MLH1P40692 756 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 GARSP41250 739 aaKnown RBP10.24□□□□□ -0.77
CMSS1-201ENST00000421999 TAP1Q03518 808 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 OLFML2BQ68BL8 750 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 KDELC2Q7Z4H8 507 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
CMSS1-201ENST00000421999 CCDC13Q8IYE1 715 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 SLC35G2Q8TBE7 412 aa10.24□□□□□ -0.77
CMSS1-201ENST00000421999 SYN2Q92777 582 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms