RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 KRT18P05783 430 aaKnown RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 HAPLN1P10915 354 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 HMGA1P17096 107 aaKnown RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 PLCG1P19174 1290 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ZNF131P52739 623 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 MLLT6P55198 1093 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 KCNA1Q09470 495 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ITPRIPL2Q3MIP1 535 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ARHGAP15Q53QZ3 475 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 RILPL1Q5EBL4 403 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 DGKKQ5KSL6 1271 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ADALQ6DHV7 355 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 CRELD2Q6UXH1 353 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 USP49Q70CQ1 688 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ITIH5Q86UX2 942 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 EFCAB13Q8IY85 973 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 CMTM8Q8IZV2 173 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 USP13Q92995 863 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 CYP2S1Q96SQ9 504 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 FAM83CQ9BQN1 747 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 PI4K2AQ9BTU6 479 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 OXCT2Q9BYC2 517 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 PARVGQ9HBI0 331 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 DPP3Q9NY33 737 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 TBC1D7Q9P0N9 293 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ODF2LQ9ULJ1 636 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 MAGED2Q9UNF1 606 aaPredicted RBP8.76□□□□□ -1.01
VIM-202ENST00000421459 INVSQ9Y283 1065 aa8.76□□□□□ -1.01
VIM-202ENST00000421459 ASPMQ8IZT6 3477 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 H3BQV1 296 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 XPOTO43592 962 aaKnown RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 RNF40O75150 1001 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 ACAT1P24752 427 aaKnown RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 ADSSP30520 456 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 UBA7P41226 1012 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 TUFMP49411 452 aaKnown RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 MCM2P49736 904 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 GALK1P51570 392 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 NLRP12P59046 1061 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 GTF2BQ00403 316 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 RUNX3Q13761 415 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 TAF12Q16514 161 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 DDR2Q16832 855 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 C8orf34Q49A92 452 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 AASDHQ4L235 1098 aaPredicted RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 TMEM196Q5HYL7 178 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 N4BP2L1Q5TBK1 243 aaPredicted RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 TCEAL6Q6IPX3 200 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 DYMQ7RTS9 669 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 RAD54LQ92698 747 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 EZH1Q92800 747 aaPredicted RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 TCEAL3Q969E4 200 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 MSANTD3Q96H12 275 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 EPSTI1Q96J88 318 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 TMX3Q96JJ7 454 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 HHIPQ96QV1 700 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 SLC22A12Q96S37 553 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 OBP2AQ9NY56 170 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 KCND2Q9NZV8 630 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 KCNG1Q9UIX4 513 aa8.75□□□□□ -1.01
VIM-202ENST00000421459 AGO2Q9UKV8 859 aaKnown RBP8.75□□□□□ -1.01
VIM-202ENST00000421459 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
VIM-202ENST00000421459 WDFY3Q8IZQ1 3526 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 GOLGA8IPA6NC78 632 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 GOLGA8JA6NMD2 632 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 KPNA7A9QM74 516 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 H0YCG3 227 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 TM4SF5O14894 197 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 LRP3O75074 770 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 PRPF40AO75400 957 aaKnown RBP8.74□□□□□ -1.01
VIM-202ENST00000421459 TADA3O75528 432 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 RPP40O75818 363 aaKnown RBP8.74□□□□□ -1.01
VIM-202ENST00000421459 FGF19O95750 216 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 CYP2F1P24903 491 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 CDC25CP30307 473 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 CNR2P34972 360 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 TAF6P49848 677 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 VEPH1Q14D04 833 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 KYAT1Q16773 422 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 ST3GAL2Q16842 350 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 ARL6IP4Q66PJ3 421 aaKnown RBP8.74□□□□□ -1.01
VIM-202ENST00000421459 OSTM1Q86WC4 334 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 METTL23Q86XA0 190 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 SFR1Q86XK3 245 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 CD302Q8IX05 232 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 THEM5Q8N1Q8 247 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 GAB3Q8WWW8 586 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 KCNN1Q92952 543 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 SAAL1Q96ER3 474 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 CALML4Q96GE6 196 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 GCNAQ96QF7 691 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 FAM213AQ9BRX8 229 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 FGFBP2Q9BYJ0 223 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 LINC00597Q9H2U6 94 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 TRPC7Q9HCX4 862 aa8.74□□□□□ -1.01
VIM-202ENST00000421459 THG1LQ9NWX6 298 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms