RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GPR158Q5T848 1215 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 DCP1BQ8IZD4 617 aaKnown RBP18.72■□□□□ 0.59
MSH6-203ENST00000420813 FAM200AQ8TCP9 573 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
MSH6-203ENST00000420813 HINFPQ9BQA5 517 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 LPIN3Q9BQK8 851 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 TASP1Q9H6P5 420 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 C8orf33Q9H7E9 229 aaPredicted RBP18.72■□□□□ 0.59
MSH6-203ENST00000420813 TMEM206Q9H813 350 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 IL21Q9HBE4 155 aa18.72■□□□□ 0.59
MSH6-203ENST00000420813 A0A087X0B3 334 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 DPYSL4O14531 572 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 HAPLN1P10915 354 aaPredicted RBP18.71■□□□□ 0.59
MSH6-203ENST00000420813 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
MSH6-203ENST00000420813 TFAMQ00059 246 aaKnown RBP18.71■□□□□ 0.59
MSH6-203ENST00000420813 PPP2R5DQ14738 602 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 LRRTM3Q86VH5 581 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 SYCP3Q8IZU3 236 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 LRRC52Q8N7C0 313 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 SAAL1Q96ER3 474 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 GCNAQ96QF7 691 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 EPC1Q9H2F5 836 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 LMAN1LQ9HAT1 526 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 PANK4Q9NVE7 773 aa18.71■□□□□ 0.59
MSH6-203ENST00000420813 RBAKQ9NYW8 714 aaPredicted RBP18.71■□□□□ 0.59
MSH6-203ENST00000420813 KIAA0391O15091 583 aaKnown RBP18.7■□□□□ 0.58
MSH6-203ENST00000420813 STX6O43752 255 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 EXTL3O43909 919 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 ITGB3P05106 788 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 CHRNB1P11230 501 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 CCNE1P24864 410 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 POLR2BP30876 1174 aaKnown RBP18.7■□□□□ 0.58
MSH6-203ENST00000420813 CCR3P51677 355 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 NRLP54845 237 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 WNT7BP56706 349 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 TSPY1Q01534 308 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 NFE2Q16621 373 aaPredicted RBP18.7■□□□□ 0.58
MSH6-203ENST00000420813 TSSK4Q6SA08 328 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 CCDC65Q8IXS2 484 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 KIAA2013Q8IYS2 634 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 C1orf127Q8N9H9 656 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 SPATA18Q8TC71 538 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 LEO1Q8WVC0 666 aaPredicted RBP18.7■□□□□ 0.58
MSH6-203ENST00000420813 ABI2Q9NYB9 513 aaPredicted RBP18.7■□□□□ 0.58
MSH6-203ENST00000420813 ITGA11Q9UKX5 1188 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 PCDHB5Q9Y5E4 795 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 GREB1Q4ZG55 1949 aa18.7■□□□□ 0.58
MSH6-203ENST00000420813 ANAPC1Q9H1A4 1944 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 K7ELQ4 463 aaPredicted RBP18.69■□□□□ 0.58
MSH6-203ENST00000420813 PRAMEF12O95522 483 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 TDGF1P13385 188 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 KPNA1P52294 538 aaPredicted RBP18.69■□□□□ 0.58
MSH6-203ENST00000420813 PLCB2Q00722 1185 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 LRRC32Q14392 662 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 TAF12Q16514 161 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 STXBP4Q6ZWJ1 553 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
MSH6-203ENST00000420813 TMEM86AQ8N2M4 240 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 PDCL2Q8N4E4 241 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 ZSWIM2Q8NEG5 633 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 BPIFB1Q8TDL5 484 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 LRRC3BQ96PB8 259 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 ACBD6Q9BR61 282 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 CBWD1Q9BRT8 395 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 PANK2Q9BZ23 570 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 LRRC27Q9C0I9 530 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 TNMDQ9H2S6 317 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 GDAP2Q9NXN4 497 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 AGAP1Q9UPQ3 857 aa18.69■□□□□ 0.58
MSH6-203ENST00000420813 MYBPHLA2RUH7 354 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 SLC38A8A6NNN8 435 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 SOBPA7XYQ1 873 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 HUS1O60921 280 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 CTHP32929 405 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 CYP4F8P98187 520 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 STK38Q15208 465 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 GPD1LQ8N335 351 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 DCLK2Q8N568 766 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 PDILTQ8N807 584 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 LINC00301Q8NCQ3 95 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 CXorf38Q8TB03 319 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 GIPC2Q8TF65 315 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 FGFBP2Q9BYJ0 223 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 BACH2Q9BYV9 841 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 CUEDC2Q9H467 287 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 ABCB6Q9NP58 842 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 NCDNQ9UBB6 729 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 L1RE1Q9UN81 338 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 SMG5Q9UPR3 1016 aaKnown RBP18.68■□□□□ 0.58
MSH6-203ENST00000420813 PTPRDP23468 1912 aa18.68■□□□□ 0.58
MSH6-203ENST00000420813 GOLGA8IPA6NC78 632 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 GOLGA8JA6NMD2 632 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 SPECC1L-ADORA2AF8WAN1 911 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 PPP6R2O75170 966 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 PRPF6O94906 941 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 CSH1P0DML2 217 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 CSH2P0DML3 217 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 HMGA1P17096 107 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
MSH6-203ENST00000420813 RBP5P82980 135 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms