RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SKILP12757 684 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 PRKCIP41743 596 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 BPIFB4P59827 614 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 DSG1Q02413 1049 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 ARID5AQ03989 594 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-206ENST00000420706 PTK2Q05397 1052 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 ORC1Q13415 861 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 ASIC2Q16515 512 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 HGSNATQ68CP4 663 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 FMNL3Q8IVF7 1028 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-206ENST00000420706 SPPL3Q8TCT6 385 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 PANX2Q96RD6 677 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 DPEP3Q9H4B8 488 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 STK39Q9UEW8 545 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 TSC2P49815 1807 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 H7C4K7 107 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ATP2C2O75185 946 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 VDRP11473 427 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 CYP11B1P15538 503 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 PTPN1P18031 435 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ACAT1P24752 427 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 SMAD3P84022 425 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 MEA1Q16626 185 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 HABP4Q5JVS0 413 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ACOT1Q86TX2 421 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 VPS52Q8N1B4 723 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 OR10T2Q8NGX3 314 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 RIN2Q8WYP3 895 aaPredicted RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 PIK3R5Q8WYR1 880 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 HEXIM2Q96MH2 286 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 CHP1Q99653 195 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 LPIN3Q9BQK8 851 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ZSWIM1Q9BR11 485 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 HAUS4Q9H6D7 363 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ALG13Q9NP73 1137 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 ZNHIT6Q9NWK9 470 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 PUF60Q9UHX1 559 aaKnown RBP13.3□□□□□ -0.28
TMEM53-206ENST00000420706 CDH9Q9ULB4 789 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 LZTS1Q9Y250 596 aa13.3□□□□□ -0.28
TMEM53-206ENST00000420706 PLXNA4Q9HCM2 1894 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 LILRB3O75022 631 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 SERPING1P05155 500 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 CTSAP10619 480 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 FECHP22830 423 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 PCSK1P29120 753 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 GNA15P30679 374 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 GLUD2P49448 558 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 CDK17Q00537 523 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 UBE3AQ05086 875 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 KLHL30Q0D2K2 578 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF280DQ6N043 979 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 KIAA1841Q6NSI8 718 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 GPR65Q8IYL9 337 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 POF1BQ8WVV4 589 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 TFAP2BQ92481 460 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 DDX1Q92499 740 aaKnown RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 TNIP3Q96KP6 325 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 TMEM209Q96SK2 561 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 OXCT2Q9BYC2 517 aaPredicted RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 CRTAC1Q9NQ79 661 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 BACE2Q9Y5Z0 518 aa13.29□□□□□ -0.28
TMEM53-206ENST00000420706 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
TMEM53-206ENST00000420706 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 OR6C75A6NL08 312 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 H3BNC9 293 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PTMAP06454 111 aaKnown RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PLEKP08567 350 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 CD19P15391 556 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 CHRNB2P17787 502 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 DNAJB1P25685 340 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 DNAJB2P25686 324 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 ERVFC1P60507 584 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PSMC1P62191 440 aaKnown RBP13.28□□□□□ -0.28
TMEM53-206ENST00000420706 GPM6BQ13491 265 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 CNGA2Q16280 664 aa13.28□□□□□ -0.28
TMEM53-206ENST00000420706 PSMD5Q16401 504 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms