RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GOLGA8IPA6NC78 632 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 ZNF233A6NK53 670 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 GOLGA8JA6NMD2 632 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 F13A1P00488 732 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 GLULP15104 373 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 CD72P21854 359 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 GABRR2P28476 465 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 CDC25CP30307 473 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 VIPR2P41587 438 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 RPS9P46781 194 aaKnown RBP22.96■■□□□ 1.27
PTPN4-202ENST00000420482 MYO1EQ12965 1108 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 FOXD4L5Q5VV16 416 aaPredicted RBP22.96■■□□□ 1.27
PTPN4-202ENST00000420482 CNNM4Q6P4Q7 775 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 POTEHQ6S545 545 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 C1orf127Q8N9H9 656 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 SPATA18Q8TC71 538 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 FOXD4L4Q8WXT5 416 aaPredicted RBP22.96■■□□□ 1.27
PTPN4-202ENST00000420482 MSANTD3Q96H12 275 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 ABI2Q9NYB9 513 aaPredicted RBP22.96■■□□□ 1.27
PTPN4-202ENST00000420482 FBXO4Q9UKT5 387 aa22.96■■□□□ 1.27
PTPN4-202ENST00000420482 HEPACAM2A8MVW5 462 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 LRRN2O75325 713 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 TNNC2P02585 160 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 SP9P0CG40 484 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 SCN1AP35498 2009 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 BFSP1Q12934 665 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 ACBD6Q9BR61 282 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 FGFBP2Q9BYJ0 223 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 PDE11AQ9HCR9 933 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 CACNA1AO00555 2505 aa22.95■■□□□ 1.26
PTPN4-202ENST00000420482 UBE4BO95155 1302 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 SOAT2O75908 522 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 LMNAP02545 664 aaKnown RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 HAPLN1P10915 354 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 LHX1P48742 406 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 MLLT6P55198 1093 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 SNRPFP62306 86 aaKnown RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 ZNF528Q3MIS6 628 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 FOXD4L6Q3SYB3 417 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 FAM26FQ5R3K3 315 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 GPR158Q5T848 1215 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 SHC4Q6S5L8 630 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 FOXD4L3Q6VB84 417 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 TTC9BQ8N6N2 239 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 CLDN23Q96B33 292 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 C7orf25Q9BPX7 421 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 GDAP2Q9NXN4 497 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 OBP2AQ9NY56 170 aa22.94■■□□□ 1.26
PTPN4-202ENST00000420482 MTF2Q9Y483 593 aaPredicted RBP22.94■■□□□ 1.26
PTPN4-202ENST00000420482 DCHS1Q96JQ0 3298 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 CHADO15335 359 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 POLR2DO15514 142 aaKnown RBP22.93■■□□□ 1.26
PTPN4-202ENST00000420482 TARSP26639 723 aaKnown RBP22.93■■□□□ 1.26
PTPN4-202ENST00000420482 PCSK1P29120 753 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 PPP2R5DQ14738 602 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 DUOXA2Q1HG44 320 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 GAREM2Q75VX8 874 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 HS2ST1Q7LGA3 356 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 ARID3BQ8IVW6 561 aaPredicted RBP22.93■■□□□ 1.26
PTPN4-202ENST00000420482 PDCL2Q8N4E4 241 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 TOP6BLQ8N6T0 577 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 ZSWIM2Q8NEG5 633 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 LEO1Q8WVC0 666 aaPredicted RBP22.93■■□□□ 1.26
PTPN4-202ENST00000420482 FAM3CQ92520 227 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 LPIN3Q9BQK8 851 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 IER2Q9BTL4 223 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 MTMR12Q9C0I1 747 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 TASP1Q9H6P5 420 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 DDX43Q9NXZ2 648 aaKnown RBP22.93■■□□□ 1.26
PTPN4-202ENST00000420482 SNX9Q9Y5X1 595 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 PIAS3Q9Y6X2 628 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 OTOGLQ3ZCN5 2332 aa22.93■■□□□ 1.26
PTPN4-202ENST00000420482 ATF6P18850 670 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 WEE1P30291 646 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 RPL10AP62906 217 aaKnown RBP22.92■■□□□ 1.26
PTPN4-202ENST00000420482 FCHO2Q0JRZ9 810 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 ARHGAP29Q52LW3 1261 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 UNC13DQ70J99 1090 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 DPH6Q7L8W6 267 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 CEP57L1Q8IYX8 460 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 ZNF507Q8TCN5 953 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 ABCB6Q9NP58 842 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 INTS13Q9NVM9 706 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 THG1LQ9NWX6 298 aaKnown RBP22.92■■□□□ 1.26
PTPN4-202ENST00000420482 HSPBP1Q9NZL4 362 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 NDRG2Q9UN36 371 aaKnown RBP22.92■■□□□ 1.26
PTPN4-202ENST00000420482 L1RE1Q9UN81 338 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 R4GN57 208 aa22.92■■□□□ 1.26
PTPN4-202ENST00000420482 NRG2O14511 850 aaPredicted RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 KINO60870 393 aaKnown RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 PRPF40AO75400 957 aaKnown RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 CSH1P0DML2 217 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 CSH2P0DML3 217 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 DDX6P26196 483 aaKnown RBP eCLIP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 WNT7BP56706 349 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 LRRTM3Q86VH5 581 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 WDR49Q8IV35 697 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 GIPC2Q8TF65 315 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 HPS3Q969F9 1004 aa22.91■■□□□ 1.26
PTPN4-202ENST00000420482 FNBP1Q96RU3 617 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms