RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 OPN1MW2P0DN77 364 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 OPN1MW3P0DN78 364 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 SYN1P17600 705 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 KRT4P19013 534 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 DNAJB1P25685 340 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 PHKA1P46020 1223 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 MTIF2P46199 727 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 PMS1P54277 932 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 SLC12A2P55011 1212 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 PCBP3P57721 371 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 ZBTB16Q05516 673 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 PRKG1Q13976 671 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 CYLC2Q14093 348 aaPredicted RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 SPIDRQ14159 915 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 SQLEQ14534 574 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 NAA25Q14CX7 972 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 WDR43Q15061 677 aaKnown RBP eCLIP6.9□□□□□ -1.34e-8■□□□□ 11
XIST-202ENST00000417942 CCDC40Q4G0X9 1142 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 CEP55Q53EZ4 464 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 KRTCAP3Q53RY4 240 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 TDRD10Q5VZ19 366 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 KLC3Q6P597 504 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 FASTKD5Q7L8L6 764 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 NLRX1Q86UT6 975 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 C1QL4Q86Z23 238 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 C12orf56Q8IXR9 622 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ZNF565Q8N9K5 539 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 DENND1AQ8TEH3 1009 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ATL1Q8WXF7 558 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ANKS1AQ92625 1134 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 INTS4Q96HW7 963 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 CCDC138Q96M89 665 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 TTC25Q96NG3 672 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 SRPK1Q96SB4 655 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 TM9SF2Q99805 663 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 CIB1Q99828 191 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 EIF2AK1Q9BQI3 630 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 GPATCH1Q9BRR8 931 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 DRC3Q9H069 523 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 DENND2DQ9H6A0 471 aaPredicted RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 PREBQ9HCU5 417 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 INIPQ9NRY2 104 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ZIM2Q9NZV7 527 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 SUCLA2Q9P2R7 463 aaPredicted RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 EXTL2Q9UBQ6 330 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 PTBP2Q9UKA9 531 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.3
XIST-202ENST00000417942 C15orf41Q9Y2V0 281 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 MED16Q9Y2X0 877 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 KIF7Q2M1P5 1343 aa6.9□□□□□ -1.3
XIST-202ENST00000417942 ERBINQ96RT1 1412 aa6.9□□□□□ -1.31
XIST-202ENST00000417942 ALG1L2C9J202 215 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 L7N2F9 121 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 MEIS1O00470 390 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 APOL1O14791 398 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 DGKIO75912 1065 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 DNAJC8O75937 253 aaPredicted RBP6.89□□□□□ -1.31
XIST-202ENST00000417942 ALDH1A2O94788 518 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 FKBP9O95302 570 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 TRIM16O95361 564 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 SLU7O95391 586 aaKnown RBP6.89□□□□□ -1.31
XIST-202ENST00000417942 NPTXRO95502 500 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 IFIT1P09914 478 aaKnown RBP6.89□□□□□ -1.31
XIST-202ENST00000417942 GNAT1P11488 350 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 TFEBP19484 476 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 NFKBIAP25963 317 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 SLC8A1P32418 973 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 SOX9P48436 509 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CCT5P48643 541 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 ACADVLP49748 655 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 SULT1E1P49888 294 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
XIST-202ENST00000417942 ST5P78524 1137 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 PSMD6Q15008 389 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 KLHL40Q2TBA0 621 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 IGSF11Q5DX21 431 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 TBC1D9BQ66K14 1250 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 C11orf88Q6PI97 169 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 B3GNT6Q6ZMB0 384 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 UNC5AQ6ZN44 842 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 MAMDC2Q7Z304 686 aaPredicted RBP6.89□□□□□ -1.31
XIST-202ENST00000417942 ZNF554Q86TJ5 538 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 IRF2BP1Q8IU81 584 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 GALNT13Q8IUC8 556 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 SPPL2CQ8IUH8 684 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CD302Q8IX05 232 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 NRSN1Q8IZ57 195 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 LRRC71Q8N4P6 559 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 CCDC112Q8NEF3 446 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 PJA1Q8NG27 643 aa6.89□□□□□ -1.31
XIST-202ENST00000417942 PLBD2Q8NHP8 589 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms