RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SLC22A17Q8WUG5 538 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 TSR2Q969E8 191 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 KISS1RQ969F8 398 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 MEGF10Q96KG7 1140 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 EXOC2Q96KP1 924 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 MYRFLQ96LU7 910 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 MMTAG2Q9BU76 263 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 BRINP2Q9C0B6 783 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 MKRN2Q9H000 416 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 PRORYQ9H606 182 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 WDR6Q9NNW5 1121 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 TMEM9BQ9NQ34 198 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 C1GALT1Q9NS00 363 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 SPTLC3Q9NUV7 552 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 MCM9Q9NXL9 1143 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 DKK4Q9UBT3 224 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 RPS6KL1Q9Y6S9 549 aa6.13□□□□□ -1.43
ECHDC1-206ENST00000417628 KALRNO60229 2985 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 LNP1A1A4G5 178 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 MYH7BA7E2Y1 1941 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 AGRPO00253 132 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 SGSM2O43147 1006 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 TBX1O43435 398 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CHRNA1P02708 482 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 UQCRFS1P1P0C7P4 283 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 BMP3P12645 472 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 LAMP2P13473 410 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 COL5A1P20908 1838 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CD247P20963 164 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 SCP2P22307 547 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 EDNRBP24530 442 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 MAP4P27816 1152 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 L1CAMP32004 1257 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CXCL12P48061 93 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 MASP1P48740 699 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 TTC3P53804 2025 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 PPP2R2AP63151 447 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 RNF4P78317 190 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 ATP8B2P98198 1209 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 KLRC3Q07444 240 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CDK5R2Q13319 367 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FZD5Q13467 585 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 BAATQ14032 418 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 LY6KQ17RY6 165 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 ZC3H12BQ5HYM0 836 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM209AQ5JX71 171 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FREM2Q5SZK8 3169 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CCDC62Q6P9F0 684 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CACNA2D4Q7Z3S7 1137 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM20CQ8IXL6 584 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM9BQ8IZU0 186 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 SYNPOQ8N3V7 929 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 LRRN4CLQ8ND94 238 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 PIBF1Q8WXW3 757 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 CHMP4CQ96CF2 233 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FCRL3Q96P31 734 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 GBP4Q96PP9 640 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 NACC1Q96RE7 527 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 SALL3Q9BXA9 1300 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FTHL17Q9BXU8 183 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 UBA5Q9GZZ9 404 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 RANBP17Q9H2T7 1088 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 GP6Q9HCN6 339 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 COL4A3BPQ9Y5P4 624 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 FBN3Q75N90 2809 aa6.12□□□□□ -1.43
ECHDC1-206ENST00000417628 TEX51A0A1B0GUA7 166 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 B4DLN1 442 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 PPFIA2O75334 1257 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 LEFTY1O75610 366 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 SMIM10L2AP0DMW4 78 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 SMIM10L2BP0DMW5 78 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 IBSPP21815 317 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 ETV3P41162 512 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 GRIA2P42262 883 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 MRPL12P52815 198 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 TRAF1Q13077 416 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 MAP7Q14244 749 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 UAP1L1Q3KQV9 507 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 CCNI2Q6ZMN8 369 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 GET4Q7L5D6 327 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 ADAT2Q7Z6V5 191 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 WDR5BQ86VZ2 330 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 RPAP2Q8IXW5 612 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 NME8Q8N427 588 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 TOP6BLQ8N6T0 577 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 DYNLL2Q96FJ2 89 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 MRGPRX3Q96LB0 322 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 ZNF558Q96NG5 402 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 AARSD1Q9BTE6 412 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 ASPNQ9BXN1 380 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 GBP3Q9H0R5 595 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 CWH43Q9H720 699 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
ECHDC1-206ENST00000417628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms