RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ESYT3A0FGR9 886 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MIF4GDA9UHW6 222 aaKnown RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 O00370 1275 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 LSM8O95777 96 aaKnown RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PDGFRBP09619 1106 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MYBL2P10244 700 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 IGFBP6P24592 240 aaPredicted RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 YY1P25490 414 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PEX5P50542 639 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MGAT3Q09327 533 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 SH3TC2Q8TF17 1288 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 GAD1Q99259 594 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 CARD9Q9H257 536 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 SYNCQ9H7C4 482 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MRPL47Q9HD33 250 aaKnown RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 ST7Q9NRC1 585 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PARVAQ9NVD7 372 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PADI3Q9ULW8 664 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PTGESO14684 152 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 RAD51CO43502 376 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 MGEA5O60502 916 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 FKTNO75072 461 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 CALB1P05937 261 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 CYP3A5P20815 502 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 INCA1Q0VD86 236 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 SOWAHAQ2M3V2 549 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 FBXO47Q5MNV8 452 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 WDR93Q6P2C0 686 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 DCUN1D2Q6PH85 259 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 CALR3Q96L12 384 aaKnown RBP11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 ERVK-5Q9HDB9 667 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 SCINQ9Y6U3 715 aa11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 TDRD15B5MCY1 1934 aaKnown RBP11.31□□□□□ -0.6
SMPD4P1-201ENST00000416717 TARSL2A2RTX5 802 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 KPNA7A9QM74 516 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 GPR182O15218 404 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 ERLIN1O75477 346 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 SASH3O75995 380 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 HEXIM1O94992 359 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 CD4P01730 458 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 GLI1P08151 1106 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 VDRP11473 427 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 KCNE1P15382 129 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 GRK4P32298 578 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 CTNNA1P35221 906 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PAK2Q13177 524 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 BEND6Q5SZJ8 279 aaPredicted RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 SEL1L2Q5TEA6 688 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 STIM2Q9P246 746 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TMEM59LQ9UK28 342 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PCDHA3Q9Y5H8 950 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PTCH2Q9Y6C5 1203 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC66A2RUB6 948 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 A8MXQ7 604 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PIRO00625 290 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 XPOTO43592 962 aaKnown RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PROSCO94903 275 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 ERBB2P04626 1255 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 ATF7P17544 494 aaPredicted RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 RGS7P49802 495 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TAS2R40P59535 323 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 OGDHQ02218 1023 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 GUCY2DQ02846 1103 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 LPIN1Q14693 890 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TRADDQ15628 312 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 PPP1R26Q5T8A7 1209 aaPredicted RBP11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 LHX8Q68G74 356 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 IFT81Q8WYA0 676 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 FAXDC2Q96IV6 333 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 EPB41L5Q9HCM4 733 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 KLHL11Q9NVR0 708 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 AMACRQ9UHK6 382 aa11.3□□□□□ -0.6
SMPD4P1-201ENST00000416717 TULP2O00295 520 aa11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 SART1O43290 800 aaKnown RBP11.29□□□□□ -0.6
SMPD4P1-201ENST00000416717 FGFR1P11362 822 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms