RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 GRIA3P42263 894 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 RAB27AP51159 221 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 HNRNPMP52272 730 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 ZNF135P52742 658 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 MC2RQ01718 297 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 TUBB3Q13509 450 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 PIN1Q13526 163 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 PLS1Q14651 629 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 PREPLQ4J6C6 727 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC30A10Q6XR72 485 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 TMTC2Q8N394 836 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 JPH3Q8WXH2 748 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 LPIN2Q92539 896 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 FBXL20Q96IG2 436 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 BBC3Q96PG8 261 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 TIMP4Q99727 224 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 AMBRA1Q9C0C7 1298 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLAMF7Q9NQ25 335 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 KLC4Q9NSK0 619 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 SEMA4GQ9NTN9 838 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 ZNF180Q9UJW8 692 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 AGAP1Q9UPQ3 857 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 PCDHA1Q9Y5I3 950 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 ABCC8Q09428 1581 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 A0A088AWK7 358 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 WDR27A2RRH5 827 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 PROP1O75360 226 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 ALDH2P05091 517 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 PHKA1P46020 1223 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 AMOTQ4VCS5 1084 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 CCDC157Q569K6 752 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 IFIT1BQ5T764 474 aaKnown RBP4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 FAM160B1Q5W0V3 765 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 TAF2Q6P1X5 1199 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 TSHZ1Q6ZSZ6 1077 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 GRASPQ7Z6J2 395 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 GRAMD1CQ8IYS0 662 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 SH2D3CQ8N5H7 860 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 PSD4Q8NDX1 1056 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 TOR1AIP2Q8NFQ8 470 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 KLHDC4Q8TBB5 520 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC35G2Q8TBE7 412 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 BRIX1Q8TDN6 353 aaKnown RBP4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 EVI5LQ96CN4 794 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC35A4Q96G79 324 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 CGRRF1Q99675 332 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 PRDM13Q9H4Q3 707 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 RSAD1Q9HA92 442 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 SARS2Q9NP81 518 aaKnown RBP4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 FANCIQ9NVI1 1328 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 STXBP5LQ9Y2K9 1186 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 NR2E3Q9Y5X4 410 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 RAD54BQ9Y620 910 aa4.59□□□□□ -1.67
HMGB3P23-201ENST00000414981 AP1G1O43747 822 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 KIF20AO95235 890 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 MAP4K4O95819 1239 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 IGLV2-14P01704 120 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 AHSGP02765 367 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 PPP3CBP16298 524 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 HSPA6P17066 643 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 WT1P19544 449 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 CD38P28907 300 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 NDUFV1P49821 464 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 TOB1P50616 345 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 SOX10P56693 466 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 NHLH1Q02575 133 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 GORABQ5T7V8 394 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 SYCE2Q6PIF2 218 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 RD3Q7Z3Z2 195 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 GPATCH11Q8N954 259 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 B3GALNT2Q8NCR0 500 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 MYCBPAPQ8TBZ2 947 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 DIS3LQ8TF46 1054 aaKnown RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZNF764Q96H86 408 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 LRFN3Q9BTN0 628 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 CDH19Q9H159 772 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 R3HDMLQ9H3Y0 253 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 KIAA1586Q9HCI6 787 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 PTGFRNQ9P2B2 879 aa4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 LAS1LQ9Y4W2 734 aaKnown RBP4.58□□□□□ -1.68
HMGB3P23-201ENST00000414981 ADM5C9JUS6 153 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 H3BML4 177 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 THP07101 528 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 U2AF1L5P0DN76 240 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 HDCP19113 662 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 ITGALP20701 1170 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 PTH2RP49190 550 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 MAPK10P53779 464 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 U2AF1Q01081 240 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 FGL2Q14314 439 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 KHDC1LQ5JSQ8 128 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 SFRP4Q6FHJ7 346 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 B3GNT9Q6UX72 402 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 FAM43BQ6ZT52 329 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 NME8Q8N427 588 aa4.57□□□□□ -1.68
HMGB3P23-201ENST00000414981 FAM109AQ8N4B1 249 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms