RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SMU1Q2TAY7 513 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 KBTBD12Q3ZCT8 623 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 TTC39AQ5SRH9 613 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 ZBTB41Q5SVQ8 909 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 CCDC183Q5T5S1 534 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 RRAGBQ5VZM2 374 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 CPZQ66K79 652 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 CYP20A1Q6UW02 462 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 ANKS1BQ7Z6G8 1248 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 KSR1Q8IVT5 923 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 DPP10Q8N608 796 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 CHST13Q8NET6 341 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 KIAA1524Q8TCG1 905 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 DLG3Q92796 817 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 FATE1Q969F0 183 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 ITFG2Q969R8 447 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 KTI12Q96EK9 354 aaPredicted RBP6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 WDR24Q96S15 920 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 SPXQ9BT56 116 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 MAGEB5Q9BZ81 275 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 PRDM12Q9H4Q4 367 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 NCOR1P1Q9H4R4 102 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 MID1IP1Q9NPA3 183 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 SLC35C2Q9NQQ7 365 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 ACTR3BQ9P1U1 418 aa6.31□□□□□ -1.4
CBX1P3-201ENST00000413296 MAPKBP1O60336 1514 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 ERICH3Q5RHP9 1530 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 COL17A1Q9UMD9 1497 aaPredicted RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CCDC151A5D8V7 595 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CCDC169A6NNP5 214 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SMPD2O60906 423 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SASH1O94885 1247 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CSPG5O95196 566 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 GGPS1O95749 300 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 PNPP00491 289 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 F9P00740 461 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 OPN1MWP04001 364 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TUBB4AP04350 444 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 OPN1MW2P0DN77 364 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 OPN1MW3P0DN78 364 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 BMP1P13497 986 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 GABRB3P28472 473 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TM4SF1P30408 202 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NTF4P34130 210 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MTHFRP42898 656 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MATR3P43243 847 aaKnown RBP eCLIP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 C21orf58P58505 322 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 RPS3AP61247 264 aaKnown RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 HTD2P86397 168 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SGCGQ13326 291 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SPIDRQ14159 915 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TBCCQ15814 346 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 GRIK5Q16478 980 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 GEN1Q17RS7 908 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 ZNF805Q5CZA5 627 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TOR1AIP1Q5JTV8 583 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 FAM69AQ5T7M9 428 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 GARNL3Q5VVW2 1013 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CCDC186Q7Z3E2 898 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NME9Q86XW9 330 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SCN4BQ8IWT1 228 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 ULK2Q8IYT8 1036 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SCML4Q8N228 414 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 AOPEPQ8N6M6 819 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SMCR8Q8TEV9 937 aaPredicted RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 WHAMMQ8TF30 809 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SEPT1Q8WYJ6 367 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 FAM162AQ96A26 154 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SIPA1Q96FS4 1042 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 APOPT1Q96IL0 206 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CHAMP1Q96JM3 812 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MRGPRX1Q96LB2 322 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TRAPPC9Q96Q05 1148 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NOL10Q9BSC4 688 aaKnown RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 RTKNQ9BST9 563 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 SEMA6BQ9H3T3 888 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 OPA3Q9H6K4 179 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 HCFC1R1Q9NWW0 138 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TAS2R10Q9NYW0 307 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 TAS2R3Q9NYW6 316 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NDUFAF4Q9P032 175 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 CALCOCO1Q9P1Z2 691 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 DNAJB9Q9UBS3 223 aa6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 ZMAT5Q9UDW3 170 aaKnown RBP6.3□□□□□ -1.4
CBX1P3-201ENST00000413296 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms