RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GALNT5Q7Z7M9 940 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SDR16C5Q8N3Y7 309 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 DCBLD1Q8N8Z6 715 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 OR10H5Q8NGA6 315 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 LMF1Q96S06 567 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 DPYSL5Q9BPU6 564 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 NUDT16L1Q9BRJ7 211 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 CNPPD1Q9BV87 410 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 KCNH6Q9H252 994 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 HELLSQ9NRZ9 838 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SIDT1Q9NXL6 827 aaKnown RBP5.19□□□□□ -1.58
BRCA1-204ENST00000412061 CPNE7Q9UBL6 633 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SLC13A4Q9UKG4 626 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 SLC39A10Q9ULF5 831 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 PCDHA1Q9Y5I3 950 aa5.19□□□□□ -1.58
BRCA1-204ENST00000412061 A0A1W2PPC4 97 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 CXorf49A8MYA2 514 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 ISM1B1AKI9 464 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 B5MCH6 92 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 IPO5O00410 1097 aaKnown RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 WNT10BO00744 389 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 NPC1O15118 1278 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 GRM6O15303 877 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 PJA2O43164 708 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 HOXA3O43365 443 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 MTHFD1P11586 935 aaKnown RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 ADD2P35612 726 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 SERPINF1P36955 418 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 RPS19P39019 145 aaKnown RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 PIK3CGP48736 1102 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 EPHB4P54760 987 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 SUMO3P55854 103 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 FOXO1Q12778 655 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 FAM111BQ6SJ93 734 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 FAM90A1Q86YD7 464 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 LRRC56Q8IYG6 542 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 GPR135Q8IZ08 494 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 ATP11CQ8NB49 1132 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 UCMAQ8WVF2 138 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 BORCS6Q96GS4 357 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 LRRC37BQ96QE4 947 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 HEPHQ9BQS7 1158 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 MRI1Q9BV20 369 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 AP1M1Q9BXS5 423 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 STK31Q9BXU1 1019 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 STK33Q9BYT3 514 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 MRPL46Q9H2W6 279 aaKnown RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 BRD9Q9H8M2 597 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 AGO3Q9H9G7 860 aaKnown RBP5.18□□□□□ -1.58
BRCA1-204ENST00000412061 ANKEF1Q9NU02 776 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 CPA4Q9UI42 421 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 JAG2Q9Y219 1238 aa5.18□□□□□ -1.58
BRCA1-204ENST00000412061 MYO1FO00160 1098 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 TRIM38O00635 465 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 STC2O76061 302 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 GNAI3P08754 354 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 RPS6KB1P23443 525 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 HOXD12P35452 270 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 LIFRP42702 1097 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 GNAI1P63096 354 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 ZBED6P86452 979 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 CCNG2Q16589 344 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 FAM214AQ32MH5 1076 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 KHDC1LQ5JSQ8 128 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 FBXO47Q5MNV8 452 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 SLFN13Q68D06 897 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 MFSD5Q6N075 450 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 DSTYKQ6XUX3 929 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 BRINP3Q76B58 766 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 LRRTM4Q86VH4 590 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 PPP1R3BQ86XI6 285 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 SIMC1Q8NDZ2 872 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 IL17RDQ8NFM7 739 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 CENPIQ92674 756 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-204ENST00000412061 NELL1Q92832 810 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 RSRC1Q96IZ7 334 aaKnown RBP5.17□□□□□ -1.58
BRCA1-204ENST00000412061 MAELQ96JY0 434 aaKnown RBP5.17□□□□□ -1.58
BRCA1-204ENST00000412061 ZNF512Q96ME7 567 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-204ENST00000412061 MYOCQ99972 504 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 C1orf43Q9BWL3 253 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 PACSIN1Q9BY11 444 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 SH3GLB2Q9NR46 395 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 PIH1D1Q9NWS0 290 aaKnown RBP5.17□□□□□ -1.58
BRCA1-204ENST00000412061 AASSQ9UDR5 926 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 SLC23A1Q9UHI7 598 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 ZDHHC8Q9ULC8 765 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 PCDHA6Q9UN73 950 aa5.17□□□□□ -1.58
BRCA1-204ENST00000412061 FSD2A1L4K1 749 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 SYT5O00445 386 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 KIAA0391O15091 583 aaKnown RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 HOXC11O43248 304 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 LAMTOR5O43504 91 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 PLOD3O60568 738 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 ALAS1P13196 640 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 FGFR2P21802 821 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 CALRP27797 417 aaKnown RBP5.16□□□□□ -1.58
BRCA1-204ENST00000412061 CFPP27918 469 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 CLRN1P58418 232 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 SPARCL1Q14515 664 aa5.16□□□□□ -1.58
BRCA1-204ENST00000412061 FAM110CQ1W6H9 321 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms