RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 KRT17Q04695 432 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 GOLGA8FQ08AF8 430 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 GOLGA8DPQ0D2H9 430 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 MAPRE1Q15691 268 aaKnown RBP21.53■■□□□ 1.04
PTPA-208ENST00000411917 RAB30Q15771 203 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 SLC47A2Q86VL8 602 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 TMEM173Q86WV6 379 aaPredicted RBP21.53■■□□□ 1.04
PTPA-208ENST00000411917 BCL7CQ8WUZ0 217 aaPredicted RBP21.53■■□□□ 1.04
PTPA-208ENST00000411917 PIK3R5Q8WYR1 880 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 TTPALQ9BTX7 342 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 NHEJ1Q9H9Q4 299 aaPredicted RBP21.53■■□□□ 1.04
PTPA-208ENST00000411917 DDX43Q9NXZ2 648 aaKnown RBP21.53■■□□□ 1.04
PTPA-208ENST00000411917 PCDH10Q9P2E7 1040 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 SSX2IPQ9Y2D8 614 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 BACE2Q9Y5Z0 518 aa21.53■■□□□ 1.04
PTPA-208ENST00000411917 TSC2P49815 1807 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 A0A1W2PPC1 479 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 LINC01553A4QN01 128 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 LSM8O95777 96 aaKnown RBP21.52■■□□□ 1.04
PTPA-208ENST00000411917 PNMA6AP0CW24 399 aaPredicted RBP21.52■■□□□ 1.04
PTPA-208ENST00000411917 USP8P40818 1118 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 CREMQ03060 361 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 CNGA2Q16280 664 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 FAM171A1Q5VUB5 890 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 NOP9Q86U38 636 aaKnown RBP21.52■■□□□ 1.04
PTPA-208ENST00000411917 OSTM1Q86WC4 334 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 TDHQ8IZJ6 230 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 B3GALNT2Q8NCR0 500 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 SLC30A5Q8TAD4 765 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 OLIG1Q8TAK6 271 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 HASPINQ8TF76 798 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 RABGGTAQ92696 567 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 CCDC42Q96M95 316 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 TWNKQ96RR1 684 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 RTP3Q9BQQ7 232 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 ZNF518BQ9C0D4 1074 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 LHX5Q9H2C1 402 aa21.52■■□□□ 1.04
PTPA-208ENST00000411917 GZMAP12544 262 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 CDH5P33151 784 aaPredicted RBP21.51■■□□□ 1.03
PTPA-208ENST00000411917 CYLC1P35663 651 aaPredicted RBP21.51■■□□□ 1.03
PTPA-208ENST00000411917 DSG1Q02413 1049 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 SLC18A3Q16572 532 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 SGO2Q562F6 1265 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 TDRD12Q587J7 1177 aaKnown RBP21.51■■□□□ 1.03
PTPA-208ENST00000411917 VARS2Q5ST30 1063 aaKnown RBP21.51■■□□□ 1.03
PTPA-208ENST00000411917 C10orf76Q5T2E6 689 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 ZNF280DQ6N043 979 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 FAM171BQ6P995 826 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 ZNF571Q7Z3V5 609 aaPredicted RBP21.51■■□□□ 1.03
PTPA-208ENST00000411917 ZNF606Q8WXB4 792 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 PKMYT1Q99640 499 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 CHP1Q99653 195 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 AGPAT1Q99943 283 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 HMGXB4Q9UGU5 601 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 NENFQ9UMX5 172 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 NME7Q9Y5B8 376 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 CEP290O15078 2479 aa21.51■■□□□ 1.03
PTPA-208ENST00000411917 EIF3CLB5ME19 914 aaKnown RBP21.5■■□□□ 1.03
PTPA-208ENST00000411917 C1RP00736 705 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 SKILP12757 684 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 TKTP29401 623 aaKnown RBP21.5■■□□□ 1.03
PTPA-208ENST00000411917 ARID5AQ03989 594 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 INTS6LQ5JSJ4 861 aaKnown RBP21.5■■□□□ 1.03
PTPA-208ENST00000411917 LCLAT1Q6UWP7 414 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 EIF3CQ99613 913 aaKnown RBP21.5■■□□□ 1.03
PTPA-208ENST00000411917 HNRNPABQ99729 332 aaKnown RBP21.5■■□□□ 1.03
PTPA-208ENST00000411917 SYT15Q9BQS2 421 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 VN1R3Q9BXE9 311 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 KCNF1Q9H3M0 494 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTPA-208ENST00000411917 MTRRQ9UBK8 725 aa21.5■■□□□ 1.03
PTPA-208ENST00000411917 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTPA-208ENST00000411917 NT5C1B-RDH14C9J2C7 533 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 I3L4J1 428 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 O00370 1275 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 FGF18O76093 207 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 PTPN1P18031 435 aaKnown RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 LMO2P25791 158 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 EIF4A3P38919 411 aaKnown RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 PBX3P40426 434 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 ERVK-21P61565 698 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 TSPY1Q01534 308 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 FMO1Q01740 532 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 SLC8B1Q6J4K2 584 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 DCP1BQ8IZD4 617 aaKnown RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 MYCBPAPQ8TBZ2 947 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 HEXIM2Q96MH2 286 aaKnown RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 C11orf84Q9BUA3 381 aaPredicted RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 ZCWPW1Q9H0M4 648 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 DEF6Q9H4E7 631 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 PUF60Q9UHX1 559 aaKnown RBP21.49■■□□□ 1.03
PTPA-208ENST00000411917 MAFFQ9ULX9 164 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 IRAK3Q9Y616 596 aa21.49■■□□□ 1.03
PTPA-208ENST00000411917 LCHNA4D1U4 455 aa21.48■■□□□ 1.03
PTPA-208ENST00000411917 NDUFA10O95299 355 aa21.48■■□□□ 1.03
PTPA-208ENST00000411917 CYP1A1P04798 512 aaPredicted RBP21.48■■□□□ 1.03
PTPA-208ENST00000411917 SETSIPP0DME0 302 aa21.48■■□□□ 1.03
PTPA-208ENST00000411917 CHRNB2P17787 502 aa21.48■■□□□ 1.03
PTPA-208ENST00000411917 GLUD2P49448 558 aa21.48■■□□□ 1.03
PTPA-208ENST00000411917 KIF11P52732 1056 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms