RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 ZDHHC7Q9NXF8 308 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
NEDD1-202ENST00000411739 NCOR1O75376 2440 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
NEDD1-202ENST00000411739 LRG1P02750 347 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 NLRP12P59046 1061 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 SDHAF4Q5VUM1 108 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 TCEAL8Q8IYN2 117 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CMASQ8NFW8 434 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-202ENST00000411739 SEPT5Q99719 369 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-202ENST00000411739 DPEP3Q9H4B8 488 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CEP72Q9P209 647 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 CUL9Q8IWT3 2517 aa12.83□□□□□ -0.36
NEDD1-202ENST00000411739 NRG2O14511 850 aaPredicted RBP12.82□□□□□ -0.36
NEDD1-202ENST00000411739 GABRDO14764 452 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 N4BP1O75113 896 aaKnown RBP12.82□□□□□ -0.36
NEDD1-202ENST00000411739 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
NEDD1-202ENST00000411739 PPP1R2P41236 205 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 GPR15P49685 360 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 MYL7Q01449 175 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 LIMS2Q7Z4I7 341 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 CORO1BQ9BR76 489 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 SNX25Q9H3E2 840 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 TMEM8AQ9HCN3 771 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 TMEM63CQ9P1W3 806 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 RWDD2AQ9UIY3 292 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 YIPF1Q9Y548 306 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 ATICP31939 592 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 MXI1P50539 228 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 TSPY1Q01534 308 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 SGSM1Q2NKQ1 1148 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 UVSSAQ2YD98 709 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 MGAT5BQ3V5L5 792 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 KRT39Q6A163 491 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 GET4Q7L5D6 327 aaPredicted RBP12.82□□□□□ -0.36
NEDD1-202ENST00000411739 TMEM86AQ8N2M4 240 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 MLKLQ8NB16 471 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 ITFG1Q8TB96 612 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 GIPC2Q8TF65 315 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 ING5Q8WYH8 240 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 CEP63Q96MT8 703 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 NECTIN4Q96NY8 510 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 WDR6Q9NNW5 1121 aaKnown RBP12.82□□□□□ -0.36
NEDD1-202ENST00000411739 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
NEDD1-202ENST00000411739 C1RP00736 705 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 WARSP23381 471 aaKnown RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 CYP2F1P24903 491 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 GBP2P32456 591 aaPredicted RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 LHX1P48742 406 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 LRMPQ12912 555 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 INTS6LQ5JSJ4 861 aaKnown RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 MYADMQ96S97 322 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 ACBD6Q9BR61 282 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 PRKAG3Q9UGI9 489 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 HMGXB4Q9UGU5 601 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 CLUHO75153 1309 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 BDP1A6H8Y1 2624 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 A8MXQ7 604 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 XYLBO75191 536 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 ASGR2P07307 311 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 GJA1P17302 382 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 DPH6Q7L8W6 267 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 FRMD5Q7Z6J6 570 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 DCP1BQ8IZD4 617 aaKnown RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 TATDN2Q93075 761 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 TCEAL4Q96EI5 215 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 OXCT2Q9BYC2 517 aaPredicted RBP12.81□□□□□ -0.36
NEDD1-202ENST00000411739 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
NEDD1-202ENST00000411739 LOC730098B7Z3J9 87 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 MBD3O95983 291 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 CD58P19256 250 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 ASPAP45381 313 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 NOP14P78316 857 aaKnown RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 SLC5A9Q2M3M2 681 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 MDH1BQ5I0G3 518 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 CAVIN1Q6NZI2 390 aaKnown RBP12.8□□□□□ -0.36
NEDD1-202ENST00000411739 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 DNAJC25Q9H1X3 360 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 RAB20Q9NX57 234 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 TACC1O75410 805 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 RHOP08100 348 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 FSHRP23945 695 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 PCSK1P29120 753 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 CCR2P41597 374 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 ALDH1A3P47895 512 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 CYP27A1Q02318 531 aa12.8□□□□□ -0.36
NEDD1-202ENST00000411739 DDR2Q16832 855 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms