RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 VPS4BO75351 444 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 HSP90AA1P07900 732 aaKnown RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 CARSP49589 748 aaKnown RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 TOB1P50616 345 aaPredicted RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 SCNN1GP51170 649 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 MPEG1Q2M385 716 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 TSHZ3Q63HK5 1081 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 ZDHHC24Q6UX98 284 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 CPXCR1Q8N123 301 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 TEX19Q8NA77 164 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 LRIG1Q96JA1 1093 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 TEPSINQ96N21 525 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 HERPUD2Q9BSE4 406 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 STK31Q9BXU1 1019 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 GPR87Q9BY21 358 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 TMX4Q9H1E5 349 aaPredicted RBP6.13□□□□□ -1.43
LSM5-206ENST00000409987 LUZP4Q9P127 313 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
LSM5-206ENST00000409987 A0A087WV62 115 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 MYO1CO00159 1063 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 POLRMTO00411 1230 aaKnown RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 ZNF185O15231 689 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 ZNF623O75123 536 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 ITGB3P05106 788 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TXNP10599 105 aaKnown RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 ACO1P21399 889 aaKnown RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 MAN2A2P49641 1150 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 RNASE9P60153 205 aaKnown RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 FZD5Q13467 585 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TRIM14Q14142 442 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 ICAM4Q14773 271 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 AMOTQ4VCS5 1084 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 ALFQ53S48 1182 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 CCDC70Q6NSX1 233 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TAPT1Q6NXT6 567 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 AATKQ6ZMQ8 1374 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TXLNBQ8N3L3 684 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 OR56A1Q8NGH5 318 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TMEM41AQ96HV5 264 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 WWC2-AS2Q96NR7 200 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 PNKPQ96T60 521 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TTLL2Q9BWV7 592 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 REXO4Q9GZR2 422 aaKnown RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 ITGB1BP2Q9UKP3 347 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 TBC1D30Q9Y2I9 924 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 USP15Q9Y4E8 981 aaPredicted RBP6.12□□□□□ -1.43
LSM5-206ENST00000409987 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
LSM5-206ENST00000409987 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 ADAMTS3O15072 1205 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 DCLK1O15075 740 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 THAP12O43422 761 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 NBNO60934 754 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 CHRM3P20309 590 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 EEF1GP26641 437 aaKnown RBP6.11□□□□□ -1.43
LSM5-206ENST00000409987 VIPR2P41587 438 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 HALP42357 657 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 TECP42680 631 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 PPM1FP49593 454 aaPredicted RBP6.11□□□□□ -1.43
LSM5-206ENST00000409987 PIGFQ07326 219 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 RRAGBQ5VZM2 374 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 RNF44Q7L0R7 432 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 SYTL1Q8IYJ3 562 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 ZNF483Q8TF39 744 aaPredicted RBP6.11□□□□□ -1.43
LSM5-206ENST00000409987 RAPGEF4Q8WZA2 1011 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 ZNF566Q969W8 418 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 FAM89AQ96GI7 184 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 TRIB1Q96RU8 372 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 SMOQ99835 787 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 TEX101Q9BY14 249 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 ZHX3Q9H4I2 956 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 CTTNBP2NLQ9P2B4 639 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 MID2Q9UJV3 735 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 GTF2A1LQ9UNN4 478 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 CHST2Q9Y4C5 530 aa6.11□□□□□ -1.43
LSM5-206ENST00000409987 XDHP47989 1333 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 CLCA1A8K7I4 914 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 GRXCR1A8MXD5 290 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 CYP27B1O15528 508 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 PLA2G6O60733 806 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 RASSF9O75901 435 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 FGFR4P22455 802 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 HIBADHP31937 336 aaKnown RBP6.1□□□□□ -1.43
LSM5-206ENST00000409987 WNT3P56703 355 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 ZNF844Q08AG5 666 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 PDCD4Q53EL6 469 aaKnown RBP6.1□□□□□ -1.43
LSM5-206ENST00000409987 TAF2Q6P1X5 1199 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 CATSPERGQ6ZRH7 1159 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 BEND5Q7L4P6 421 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 SDR16C5Q8N3Y7 309 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 FANCBQ8NB91 859 aa6.1□□□□□ -1.43
LSM5-206ENST00000409987 PSD4Q8NDX1 1056 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms