RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 TMEM35BQ8NCS4 154 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 RFWD2Q8NHY2 731 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ATP6V1E2Q96A05 226 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PPWD1Q96BP3 646 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 MRRFQ96E11 262 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ZMYM2Q9UBW7 1377 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PPLO60437 1756 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 DNAJC6O75061 913 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 TSPAN9O75954 239 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 PLS3P13797 630 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 FGFR4P22455 802 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 AKT1P31749 480 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 HORMAD1Q86X24 394 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SYCE1Q8N0S2 351 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 EPAS1Q99814 870 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 SNTG2Q9NY99 539 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 GMEB1Q9Y692 573 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ZNF500O60304 480 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 USP17L7P0C7H9 530 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 HIC1Q14526 733 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 ADGRF2Q8IZF7 708 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 RAD21L1Q9H4I0 556 aa7.66□□□□□ -1.18
SCN9A-202ENST00000409435 OLA1Q9NTK5 396 aaKnown RBP7.66□□□□□ -1.18
SCN9A-202ENST00000409435 CNTNAP2Q9UHC6 1331 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 MYO1FO00160 1098 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 PODXLO00592 558 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 INPP4BO15327 924 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 SULT1E1P49888 294 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 STX1BP61266 288 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 PDE1BQ01064 536 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 PCBP1Q15365 356 aaKnown RBP eCLIP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 USP39Q53GS9 565 aaKnown RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ARL6IP4Q66PJ3 421 aaKnown RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TMEM270Q6UE05 265 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 MPZL3Q6UWV2 235 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TMC5Q6UXY8 1006 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 PPP4R3CPQ6ZMV5 832 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 CCDC80Q76M96 950 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 MCRS1Q96EZ8 462 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 FBXO44Q9H4M3 255 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ASNSD1Q9NWL6 643 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 FMN2Q9NZ56 1722 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 NT5C1B-RDH14C9J2C7 533 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TRIM66O15016 1216 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ACADSBP45954 432 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 SERPINB10P48595 397 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 HNRNPH2P55795 449 aaKnown RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 LAMTOR4Q0VGL1 99 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 HIBCHQ6NVY1 386 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ERAP2Q6P179 960 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 UNC45BQ8IWX7 931 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 HSPH1Q92598 858 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TBC1D32Q96NH3 1257 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 GEMIN8Q9NWZ8 242 aaKnown RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 DCDC2Q9UHG0 476 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 CAPN11Q9UMQ6 739 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 COG5Q9UP83 839 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 PCDHB2Q9Y5E7 798 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 AP1G2O75843 785 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 CSH1P0DML2 217 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 CSH2P0DML3 217 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 AKAP5P24588 427 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 NAMPTP43490 491 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ACOT2P49753 483 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TAF1BQ53T94 588 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 SERPINA13PQ6UXR4 307 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 RINLQ6ZS11 566 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TSHZ1Q6ZSZ6 1077 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 MIB1Q86YT6 1006 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 HPDLQ96IR7 371 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 SPATA17Q96L03 361 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 MAGEB10Q96LZ2 347 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 TTPALQ9BTX7 342 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 AGO4Q9HCK5 861 aaKnown RBP7.65□□□□□ -1.18
SCN9A-202ENST00000409435 ASIC3Q9UHC3 531 aa7.65□□□□□ -1.18
SCN9A-202ENST00000409435 DFFAO00273 331 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 SGSM1Q2NKQ1 1148 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 LBX2Q6XYB7 198 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 CDR2LQ86X02 465 aaPredicted RBP7.65□□□□□ -1.19
SCN9A-202ENST00000409435 CCDC13Q8IYE1 715 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 LRRC8CQ8TDW0 803 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 ACDQ96AP0 544 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 NT5C1AQ9BXI3 368 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 NUSAP1Q9BXS6 441 aaKnown RBP7.65□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF576Q9H609 170 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 RMI1Q9H9A7 625 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 SMPD4Q9NXE4 827 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 KCND2Q9NZV8 630 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 AK5Q9Y6K8 562 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 NFASCO94856 1347 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 C1QTNF3-AMACRE9PGA6 284 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 H0YGN5 161 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 DLL1O00548 723 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 CAPN1P07384 714 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 PYGBP11216 843 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 FGFR2P21802 821 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 SCNN1GP51170 649 aa7.65□□□□□ -1.19
SCN9A-202ENST00000409435 IL1RL1Q01638 556 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms