RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 GLI1P08151 1106 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 RHOXF2BP0C7M4 288 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 FERP16591 822 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 FAHP16930 419 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 RPS6KB1P23443 525 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 RAB27AP51159 221 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 NAP1L1P55209 391 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ST3GAL1Q11201 340 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 G3BP1Q13283 466 aaKnown RBP eCLIP5.94□□□□□ -1.46
CLK1-202ENST00000409403 NFE2Q16621 373 aaPredicted RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 ABCB5Q2M3G0 1257 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 INAVAQ3KP66 663 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 DPCR1Q3MIW9 517 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 OLFML2BQ68BL8 750 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CYB5D1Q6P9G0 228 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SLC30A9Q6PML9 568 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 FRMD7Q6ZUT3 714 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 MIB1Q86YT6 1006 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 FAM126BQ8IXS8 530 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 ARFGAP2Q8N6H7 521 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 NECAB1Q8N987 351 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 C8orf58Q8NAV2 365 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 C1orf131Q8NDD1 294 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 TRIM58Q8NG06 486 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 SPAG5Q96R06 1193 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 RHOXF2Q9BQY4 288 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CENPHQ9H3R5 247 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 PLEKHA4Q9H4M7 779 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 USP36Q9P275 1121 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 DDX20Q9UHI6 824 aaKnown RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 FAM184BQ9ULE4 1060 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CORO1CQ9ULV4 474 aaPredicted RBP5.94□□□□□ -1.46
CLK1-202ENST00000409403 NR2E3Q9Y5X4 410 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 A0A1W2PP64 1363 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 CEMIPQ8WUJ3 1361 aa5.94□□□□□ -1.46
CLK1-202ENST00000409403 KMT2BQ9UMN6 2715 aaPredicted RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 ZDBF2Q9HCK1 2354 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 AKR1B15C9JRZ8 316 aaPredicted RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 PDLIM1O00151 329 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 CYP27B1O15528 508 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 KDM1AO60341 852 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 CAND2O75155 1236 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 RTN3O95197 1032 aaPredicted RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 MMEP08473 750 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 IARSP41252 1262 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 GCLCP48506 637 aaPredicted RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 YBX1P67809 324 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 CAP1Q01518 475 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 ROR2Q01974 943 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 AKAP17AQ02040 695 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 PDIA5Q14554 519 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 NECTIN1Q15223 517 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 KCNMB1Q16558 191 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 PTPN21Q16825 1174 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 CCDC57Q2TAC2 916 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 ZNF569Q5MCW4 686 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 ETV3LQ6ZN32 361 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 TTLL7Q6ZT98 887 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 ZSWIM9Q86XI8 627 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 CNGA4Q8IV77 575 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 TEX9Q8N6V9 391 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 PDILTQ8N807 584 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 LMBR1Q8WVP7 490 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 ASB15Q8WXK1 588 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 TOE1Q96GM8 510 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 GOLPH3LQ9H4A5 285 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 KIF9Q9HAQ2 790 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 AASDHPPTQ9NRN7 309 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 RTEL1Q9NZ71 1219 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 OAS3Q9Y6K5 1087 aaKnown RBP5.93□□□□□ -1.46
CLK1-202ENST00000409403 UNC79Q9P2D8 2635 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 UBN2Q6ZU65 1347 aa5.93□□□□□ -1.46
CLK1-202ENST00000409403 E2F8A0AVK6 867 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 MAP4K4O95819 1239 aaPredicted RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 GHRP10912 638 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 SH3BGRP55822 239 aaPredicted RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 SCAND1P57086 179 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 DYNC1I2Q13409 638 aaKnown RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 TRIM14Q14142 442 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 KARSQ15046 597 aaKnown RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 KIAA0753Q2KHM9 967 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 EMC10Q5UCC4 262 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 FAM173BQ6P4H8 233 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 EMBQ6PCB8 327 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 KDM7AQ6ZMT4 941 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 TOGARAM2Q6ZUX3 1019 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 RASGRP2Q7LDG7 609 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ELOA2Q8IYF1 753 aaPredicted RBP5.92□□□□□ -1.46
CLK1-202ENST00000409403 USP38Q8NB14 1042 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 CD99L2Q8TCZ2 262 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 NUP133Q8WUM0 1156 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ZFAND2BQ8WV99 257 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 ALG3Q92685 438 aa5.92□□□□□ -1.46
CLK1-202ENST00000409403 E2F7Q96AV8 911 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms