RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 HIP1RO75146 1068 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 RHOBTB1O94844 696 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 OAZ2O95190 189 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CTDNEP1O95476 244 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 ZNF806P0C7X5 589 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 TDGF1P13385 188 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 FDPSP14324 419 aaKnown RBP8.41□□□□□ -1.06
LSM5-202ENST00000409292 CYP3A5P20815 502 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 GABRR2P28476 465 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 AVPR1AP37288 418 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CCR2P41597 374 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 MCM2P49736 904 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 SOX4Q06945 474 aaPredicted RBP8.41□□□□□ -1.06
LSM5-202ENST00000409292 SMARCB1Q12824 385 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 BFSP1Q12934 665 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 DUSP4Q13115 394 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 GPR17Q13304 367 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 MYBPC2Q14324 1141 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 DAB2IPQ5VWQ8 1189 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CD300LGQ6UXG3 332 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 ALKAL1Q6UXT8 129 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CD302Q8IX05 232 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CAMKK1Q8N5S9 505 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CEP120Q8N960 986 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 NSUN7Q8NE18 718 aaKnown RBP8.41□□□□□ -1.06
LSM5-202ENST00000409292 BEST2Q8NFU1 509 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 SHKBP1Q8TBC3 707 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 GAB3Q8WWW8 586 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 ZSWIM3Q96MP5 696 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 TMEM209Q96SK2 561 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 CXCL16Q9H2A7 254 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 ARRDC1-AS1Q9H2J1 176 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 TASP1Q9H6P5 420 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 VPS45Q9NRW7 570 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 LARSQ9P2J5 1176 aaKnown RBP8.41□□□□□ -1.06
LSM5-202ENST00000409292 HSFX1Q9UBD0 423 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 KIF3AQ9Y496 699 aa8.41□□□□□ -1.06
LSM5-202ENST00000409292 M0QZQ0 153 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 SLC16A4O15374 487 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 EPN2O95208 641 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 TYMPP19971 482 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 DDX6P26196 483 aaKnown RBP eCLIP8.4□□□□□ -1.06
LSM5-202ENST00000409292 LIG4P49917 911 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 NEK4P51957 841 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 HMGN5P82970 282 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 GUCY1B3Q02153 619 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 PON2Q15165 354 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 ZRSR1Q15695 479 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 ME3Q16798 604 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 FBXO43Q4G163 708 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 DNAJB7Q7Z6W7 309 aaPredicted RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 C2orf15Q8WU43 125 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 PSMG2Q969U7 264 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 ACDQ96AP0 544 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 C18orf25Q96B23 403 aaPredicted RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 ZMAT2Q96NC0 199 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 SEPT5Q99719 369 aaPredicted RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 LLPHQ9BRT6 129 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 RPF1Q9H9Y2 349 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 KIF9Q9HAQ2 790 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 PTPRHQ9HD43 1115 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 RBM12Q9NTZ6 932 aaKnown RBP8.4□□□□□ -1.06
LSM5-202ENST00000409292 KCND2Q9NZV8 630 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 ARHGAP28Q9P2N2 729 aa8.4□□□□□ -1.06
LSM5-202ENST00000409292 NOTCH4Q99466 2003 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 CNOT1A5YKK6 2376 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 CACNA1GO43497 2377 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 SOBPA7XYQ1 873 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 K7ESF4 209 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 MOSPD3O75425 235 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 PLS3P13797 630 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 DRD1P21728 446 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 PROZP22891 400 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 GUCY2CP25092 1073 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 WEE1P30291 646 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 LRPAP1P30533 357 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 RDXP35241 583 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 SOX9P48436 509 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 SHC2P98077 582 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 NR1H3Q13133 447 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 SRSF5Q13243 272 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 SLC10A6Q3KNW5 377 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 MGAT5BQ3V5L5 792 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 STPG1Q5TH74 334 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 CENPPQ6IPU0 288 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 Q6ZS52 159 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 TTC8Q8TAM2 541 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 SPPL2BQ8TCT7 592 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 MRPS31Q92665 395 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 POLD4Q9HCU8 107 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 GTSE1Q9NYZ3 720 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 GMPR2Q9P2T1 348 aaKnown RBP8.39□□□□□ -1.07
LSM5-202ENST00000409292 DACH1Q9UI36 760 aa8.39□□□□□ -1.07
LSM5-202ENST00000409292 R3HCC1Q9Y3T6 440 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms