RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CRYBG2Q8N1P7 616 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 OR6B3Q8NGW1 331 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 TIFAQ96CG3 184 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 RTP3Q9BQQ7 232 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 DDX43Q9NXZ2 648 aaKnown RBP21.83■■□□□ 1.09
VSX1-203ENST00000409285 HMGXB4Q9UGU5 601 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 SSX2IPQ9Y2D8 614 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 PCDHB4Q9Y5E5 795 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 BACE2Q9Y5Z0 518 aa21.83■■□□□ 1.09
VSX1-203ENST00000409285 TMEM265A0A087WTH1 108 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 GOLGA6L6A8MZA4 724 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 AKR1B15C9JRZ8 316 aaPredicted RBP21.83■■□□□ 1.08
VSX1-203ENST00000409285 H7C4K7 107 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 CTSAP10619 480 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 RAD23BP54727 409 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 THEM5Q8N1Q8 247 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 TC2NQ8N9U0 490 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 SLC4A11Q8NBS3 891 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 RBBP8NLQ8NC74 664 aaPredicted RBP21.83■■□□□ 1.08
VSX1-203ENST00000409285 FBXO22Q8NEZ5 403 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 LNX1Q8TBB1 728 aaPredicted RBP21.83■■□□□ 1.08
VSX1-203ENST00000409285 SPPL3Q8TCT6 385 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 CPLX3Q8WVH0 158 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 TNIP3Q96KP6 325 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 TWNKQ96RR1 684 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 MTRRQ9UBK8 725 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 CDH9Q9ULB4 789 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 IRAK3Q9Y616 596 aa21.83■■□□□ 1.08
VSX1-203ENST00000409285 OR6C75A6NL08 312 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 A8MXQ7 604 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 URODP06132 367 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 CCDC172P0C7W6 258 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 KRT5P13647 590 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 FERP16591 822 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 LMO2P25791 158 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 CREMQ03060 361 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 GPR153Q6NV75 609 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 CEP57Q86XR8 500 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 OR8K1Q8NGG5 319 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 TMEM176AQ96HP8 235 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 B3GALT6Q96L58 329 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 ELOVL4Q9GZR5 314 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.82■■□□□ 1.08
VSX1-203ENST00000409285 ABHD10Q9NUJ1 306 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 KIAA1257Q9ULG3 409 aa21.82■■□□□ 1.08
VSX1-203ENST00000409285 PNMA6AP0CW24 399 aaPredicted RBP21.81■■□□□ 1.08
VSX1-203ENST00000409285 CLCN1P35523 988 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 PRKCIP41743 596 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 GSDMDP57764 484 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 BPIFB4P59827 614 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 SFMBT2Q5VUG0 894 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 KIAA1841Q6NSI8 718 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 SPC24Q8NBT2 197 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 B3GALNT2Q8NCR0 500 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 OR10T2Q8NGX3 314 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 LMAN2LQ9H0V9 348 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 ALG13Q9NP73 1137 aaKnown RBP21.81■■□□□ 1.08
VSX1-203ENST00000409285 MTUS1Q9ULD2 1270 aa21.81■■□□□ 1.08
VSX1-203ENST00000409285 GREB1Q4ZG55 1949 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 LILRB3O75022 631 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 PTPN14Q15678 1187 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 PSMD5Q16401 504 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 INTS6LQ5JSJ4 861 aaKnown RBP21.8■■□□□ 1.08
VSX1-203ENST00000409285 E4F1Q66K89 784 aaPredicted RBP21.8■■□□□ 1.08
VSX1-203ENST00000409285 SLC8B1Q6J4K2 584 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 PDE12Q6L8Q7 609 aaKnown RBP21.8■■□□□ 1.08
VSX1-203ENST00000409285 IRF2BP2Q7Z5L9 587 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 POF1BQ8WVV4 589 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 RIN2Q8WYP3 895 aaPredicted RBP21.8■■□□□ 1.08
VSX1-203ENST00000409285 PKMYT1Q99640 499 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 SYT15Q9BQS2 421 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 TLR9Q9NR96 1032 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 MRPL17Q9NRX2 175 aaKnown RBP21.8■■□□□ 1.08
VSX1-203ENST00000409285 FNIP2Q9P278 1114 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 MYO7AQ13402 2215 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 REV3LO60673 3130 aa21.8■■□□□ 1.08
VSX1-203ENST00000409285 FSCN2O14926 492 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 CYP26A1O43174 497 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 GFPT2O94808 682 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 ADKP55263 362 aaKnown RBP21.79■■□□□ 1.08
VSX1-203ENST00000409285 TSPY1Q01534 308 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 PTK2Q05397 1052 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 BMS1Q14692 1282 aaKnown RBP21.79■■□□□ 1.08
VSX1-203ENST00000409285 MEA1Q16626 185 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 CTXN3Q4LDR2 81 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 FAM171BQ6P995 826 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 EPS8L1Q8TE68 723 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 PANX2Q96RD6 677 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 ZCWPW1Q9H0M4 648 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 DPEP3Q9H4B8 488 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 RXFP1Q9HBX9 757 aa21.79■■□□□ 1.08
VSX1-203ENST00000409285 NGRNQ9NPE2 291 aaKnown RBP21.79■■□□□ 1.08
VSX1-203ENST00000409285 GRM6O15303 877 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 HCRTO43612 131 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 CYP11B1P15538 503 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 FECHP22830 423 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 DNAJB1P25685 340 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 USP8P40818 1118 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 CCDC173Q0VFZ6 552 aa21.78■■□□□ 1.08
VSX1-203ENST00000409285 GPM6BQ13491 265 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms