RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 AMPD2Q01433 879 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 MCL1Q07820 350 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 BFSP1Q12934 665 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 DMC1Q14565 340 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 ANKRD1Q15327 319 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHMP3-203ENST00000409225 UAP1L1Q3KQV9 507 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 MAB21L3Q8N8X9 362 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 OR10T2Q8NGX3 314 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 USP13Q92995 863 aaPredicted RBP18.1■□□□□ 0.49
CHMP3-203ENST00000409225 SENP8Q96LD8 212 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 P2RY13Q9BPV8 354 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 PLEKHA5Q9HAU0 1116 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 DNM3Q9UQ16 869 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 FASNP49327 2511 aaKnown RBP18.1■□□□□ 0.49
CHMP3-203ENST00000409225 TTC26A0AVF1 554 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 LACTBL1A8MY62 500 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 PATE3B3GLJ2 98 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 CLTAP09496 248 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 CSRP1P21291 193 aaKnown RBP18.09■□□□□ 0.49
CHMP3-203ENST00000409225 NMT1P30419 496 aaKnown RBP18.09■□□□□ 0.49
CHMP3-203ENST00000409225 TNFSF9P41273 254 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 FXR2P51116 673 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP3-203ENST00000409225 PPP2R3AQ06190 1150 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 RING1Q06587 406 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 PSMD2Q13200 908 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
CHMP3-203ENST00000409225 ZBTB6Q15916 424 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 TTC38Q5R3I4 469 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 RINT1Q6NUQ1 792 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 CC2D1AQ6P1N0 951 aaPredicted RBP18.09■□□□□ 0.49
CHMP3-203ENST00000409225 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 SYT13Q7L8C5 426 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 DEFB124Q8NES8 71 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 HAPLN2Q9GZV7 340 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 EBF1Q9UH73 591 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 LHX6Q9UPM6 363 aa18.09■□□□□ 0.49
CHMP3-203ENST00000409225 PKD1L2Q7Z442 2459 aa18.08■□□□□ 0.49
CHMP3-203ENST00000409225 CDX4O14627 284 aaPredicted RBP18.08■□□□□ 0.48
CHMP3-203ENST00000409225 XPOTO43592 962 aaKnown RBP18.08■□□□□ 0.48
CHMP3-203ENST00000409225 RAD51AP2Q09MP3 1159 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 FBXO43Q4G163 708 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 C1orf186Q6ZWK4 172 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 CYP2U1Q7Z449 544 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 RIN3Q8TB24 985 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 ACDQ96AP0 544 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 TPSD1Q9BZJ3 242 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 C17orf75Q9HAS0 396 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 TDP1Q9NUW8 608 aa18.08■□□□□ 0.48
CHMP3-203ENST00000409225 MAPTP10636 758 aaKnown RBP18.07■□□□□ 0.48
CHMP3-203ENST00000409225 GJA4P35212 333 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 LILRA4P59901 499 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 NBR1Q14596 966 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 PMS2CLQ68D20 193 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TXNDC8Q6A555 127 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 ZPBP2Q6X784 338 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TMEM150AQ86TG1 271 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TMEM161BQ8NDZ6 487 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TTC16Q8NEE8 873 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TSTD1Q8NFU3 115 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 EZH1Q92800 747 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-203ENST00000409225 EXOC4Q96A65 974 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 BICD1Q96G01 975 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 ZCWPW1Q9H0M4 648 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 KIF9Q9HAQ2 790 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 ZMYM5Q9UJ78 669 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 TBX20Q9UMR3 447 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-203ENST00000409225 AKAP13Q12802 2813 aa18.07■□□□□ 0.48
CHMP3-203ENST00000409225 ANKRD11Q6UB99 2663 aaPredicted RBP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 NUP205Q92621 2012 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 SOBPA7XYQ1 873 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 PP2D1A8MPX8 630 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 HYAL3O43820 417 aaPredicted RBP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 BCKDHBP21953 392 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 DDX6P26196 483 aaKnown RBP eCLIP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 SMTNP53814 917 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 NLRP12P59046 1061 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 IRX4P78413 519 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 PDGFRLQ15198 375 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 USP39Q53GS9 565 aaKnown RBP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 ABCA7Q8IZY2 2146 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 CPA6Q8N4T0 437 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 SPIRE2Q8WWL2 714 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 CD101Q93033 1021 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 NTPCRQ9BSD7 190 aaKnown RBP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 ABI2Q9NYB9 513 aaPredicted RBP18.06■□□□□ 0.48
CHMP3-203ENST00000409225 STK24Q9Y6E0 443 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 TSC2P49815 1807 aa18.06■□□□□ 0.48
CHMP3-203ENST00000409225 F11P03951 625 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 PLS3P13797 630 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 DHPSP49366 369 aaPredicted RBP18.05■□□□□ 0.48
CHMP3-203ENST00000409225 PDIA5Q14554 519 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 ENOX2Q16206 610 aaKnown RBP18.05■□□□□ 0.48
CHMP3-203ENST00000409225 SPATA1Q5VX52 437 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 KCNK18Q7Z418 384 aa18.05■□□□□ 0.48
CHMP3-203ENST00000409225 C11orf74Q86VG3 221 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms