RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 OR10T2Q8NGX3 314 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ZSCAN18Q8TBC5 510 aaPredicted RBP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 FUBP3Q96I24 572 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 CEP295NLQ96MC4 621 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 CGRRF1Q99675 332 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ATXN3LQ9H3M9 355 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 AGPAT3Q9NRZ7 376 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 OBP2AQ9NY56 170 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ABI2Q9NYB9 513 aaPredicted RBP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 SNX9Q9Y5X1 595 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 SCN1AP35498 2009 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 DOCK6Q96HP0 2047 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 NOTCH4Q99466 2003 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PROB1E7EW31 1015 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 ZNF263O14978 683 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 GFRA3O60609 400 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 EXOC3O60645 756 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM163BP0C2L3 166 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 HAPLN1P10915 354 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PFKFB1P16118 471 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 GABRR2P28476 465 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 WEE1P30291 646 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 AFMP43652 599 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 CYP2J2P51589 502 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 MLLT6P55198 1093 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TNNC1P63316 161 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 EHHADHQ08426 723 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SNW1Q13573 536 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PPP2R5DQ14738 602 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 UBXN2BQ14CS0 331 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PSMD6Q15008 389 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 ANGPT1Q15389 498 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TEAD2Q15562 447 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 KNOP1Q1ED39 458 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 INTS6LQ5JSJ4 861 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TANGO2Q6ICL3 276 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TPRG1Q6ZUI0 275 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 DNAJB7Q7Z6W7 309 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TMC8Q8IU68 726 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 CBWD2Q8IUF1 395 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SPATA2LQ8IUW3 424 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 MFSD6LQ8IWD5 586 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 HS6ST3Q8IZP7 471 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 PDCL2Q8N4E4 241 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SHKBP1Q8TBC3 707 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 CSGALNACT1Q8TDX6 532 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SCFD1Q8WVM8 642 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 NKD2Q969F2 451 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SYAP1Q96A49 352 aaPredicted RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TCEAL4Q96EI5 215 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 HPDLQ96IR7 371 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 RPP25Q9BUL9 199 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 DDX23Q9BUQ8 820 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 FGFBP2Q9BYJ0 223 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 IKZF4Q9H2S9 585 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 TASP1Q9H6P5 420 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 KIF9Q9HAQ2 790 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 THG1LQ9NWX6 298 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 DDX43Q9NXZ2 648 aaKnown RBP9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 L1RE1Q9UN81 338 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 SLC27A5Q9Y2P5 690 aa9.75□□□□□ -0.85
SNORD88A-201ENST00000408314 A0A1W2PQ27 194 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 A0A1W2PQ64 194 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 A0A1W2PQD8 194 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CHADO15335 359 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CLSTN1O94985 981 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 VNN2O95498 520 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 STAU1O95793 577 aaKnown RBP9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 DLATP10515 647 aaKnown RBP9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 FCARP24071 287 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 GDI1P31150 447 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 ATICP31939 592 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CCR2P41597 374 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 SYKP43405 635 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 PDE6CP51160 858 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CYP24A1Q07973 514 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 TRPC3Q13507 836 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CUL4BQ13620 913 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CFAP221Q4G0U5 840 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 ARHGAP29Q52LW3 1261 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 GPR158Q5T848 1215 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 NELFCDQ8IXH7 590 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 MRPS31Q92665 395 aaKnown RBP9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 EXOC4Q96A65 974 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 TMEM209Q96SK2 561 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 DNAI2Q9GZS0 605 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 DNAJC25Q9H1X3 360 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 BLZF1Q9H2G9 400 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 CRISPLD1Q9H336 500 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 C8orf33Q9H7E9 229 aaPredicted RBP9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 SLC39A2Q9NP94 309 aa9.74□□□□□ -0.85
SNORD88A-201ENST00000408314 LTB4R2Q9NPC1 389 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms