RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 DOCK8Q8NF50 2099 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 NOTCH4Q99466 2003 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ZNF197O14709 1029 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 VNN2O95498 520 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 POU2F2P09086 479 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 MYL4P12829 197 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 FECHP22830 423 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ACAT1P24752 427 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 MYL7Q01449 175 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 FAM160A1Q05DH4 1040 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 BIRC3Q13489 604 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 KCNB1Q14721 858 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 MGAT5BQ3V5L5 792 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 PDZD4Q76G19 769 aaPredicted RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 DCP1BQ8IZD4 617 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 SLC44A3Q8N4M1 653 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 TTC9BQ8N6N2 239 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ENGASEQ8NFI3 743 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 TCEAL4Q96EI5 215 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 CRISPLD1Q9H336 500 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 DMAC2Q9NW81 257 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 GDAP2Q9NXN4 497 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 ABI2Q9NYB9 513 aaPredicted RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 CEP72Q9P209 647 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
FAM49A-202ENST00000406434 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 FRMD4BQ9Y2L6 1034 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 YIPF1Q9Y548 306 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 TECTAO75443 2155 aa11.11□□□□□ -0.63
FAM49A-202ENST00000406434 TRIM66O15016 1216 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 NARSO43776 548 aaKnown RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 SMC2O95347 1197 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 GJA1P17302 382 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 TUFMP49411 452 aaKnown RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 TSPY1Q01534 308 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 PLD1Q13393 1074 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 SLC5A9Q2M3M2 681 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 SOWAHAQ2M3V2 549 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 PARM1Q6UWI2 310 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 OSTM1Q86WC4 334 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 SLC9A9Q8IVB4 645 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 ADGRF2Q8IZF7 708 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 PLEKHO2Q8TD55 490 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 PARD3BQ8TEW8 1205 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 GIPC2Q8TF65 315 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 SMARCE1Q969G3 411 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 RPP25Q9BUL9 199 aaKnown RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 TMLHEQ9NVH6 421 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 FBXL21Q9UKT6 434 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
FAM49A-202ENST00000406434 NUMBLQ9Y6R0 609 aa11.1□□□□□ -0.63
FAM49A-202ENST00000406434 LRRIQ3A6PVS8 624 aaPredicted RBP11.09□□□□□ -0.63
FAM49A-202ENST00000406434 HCRTO43612 131 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 CFHP08603 1231 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 CEBPBP17676 345 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 NR2F2P24468 414 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 RPL13P26373 211 aaKnown RBP11.09□□□□□ -0.63
FAM49A-202ENST00000406434 LHX1P48742 406 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 MYL6P60660 151 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 TNNC1P63316 161 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 DLG4P78352 724 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 ADAM9Q13443 819 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 TAF12Q16514 161 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 DNAJB7Q7Z6W7 309 aaPredicted RBP11.09□□□□□ -0.63
FAM49A-202ENST00000406434 SUGP1Q8IWZ8 645 aaKnown RBP11.09□□□□□ -0.63
FAM49A-202ENST00000406434 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
FAM49A-202ENST00000406434 TOP6BLQ8N6T0 577 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 ACBD6Q9BR61 282 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 PI4K2AQ9BTU6 479 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 SNX25Q9H3E2 840 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 ASAH2Q9NR71 780 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 GTF3C4Q9UKN8 822 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
FAM49A-202ENST00000406434 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
FAM49A-202ENST00000406434 KINO60870 393 aaKnown RBP11.08□□□□□ -0.64
FAM49A-202ENST00000406434 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
FAM49A-202ENST00000406434 KRT13P13646 458 aa11.08□□□□□ -0.64
FAM49A-202ENST00000406434 LMO2P25791 158 aa11.08□□□□□ -0.64
FAM49A-202ENST00000406434 GNL1P36915 607 aaPredicted RBP11.08□□□□□ -0.64
FAM49A-202ENST00000406434 CCR2P41597 374 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms