RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 SKIP12755 728 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 WSCD1Q658N2 575 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 OSTM1Q86WC4 334 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 CPNE8Q86YQ8 564 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 UBA3Q8TBC4 463 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 TSC1Q92574 1164 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 VWCEQ96DN2 955 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 NUP85Q9BW27 656 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 FTHL17Q9BXU8 183 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 C11orf49Q9H6J7 331 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.94■□□□□ 0.46
IRF1-202ENST00000405885 O00370 1275 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 B3GAT3O94766 335 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 DDHD2O94830 711 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 ACAT1P24752 427 aaKnown RBP17.94■□□□□ 0.46
IRF1-202ENST00000405885 PTP4A2Q12974 167 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
IRF1-202ENST00000405885 C1orf53Q5VUE5 145 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 GLB1LQ6UWU2 654 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 DAAM2Q86T65 1068 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 ADGRF2Q8IZF7 708 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 SEPT8Q92599 483 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 TMEM39AQ9NV64 488 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 ADAM22Q9P0K1 906 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 HCSTQ9UBK5 93 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 GTF3C4Q9UKN8 822 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 PCDHGC3Q9UN70 934 aa17.94■□□□□ 0.46
IRF1-202ENST00000405885 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.94■□□□□ 0.46
IRF1-202ENST00000405885 HUS1O60921 280 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 MICAL2O94851 1124 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 EOMESO95936 686 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 CYP1A2P05177 515 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 GNL1P36915 607 aaPredicted RBP17.93■□□□□ 0.46
IRF1-202ENST00000405885 BRCC3P46736 316 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 GRIK3Q13003 919 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 PAPD7Q5XG87 772 aaKnown RBP17.93■□□□□ 0.46
IRF1-202ENST00000405885 CD300LGQ6UXG3 332 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 TRIM72Q6ZMU5 477 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 LIMS2Q7Z4I7 341 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 SENP8Q96LD8 212 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 TSPAN16Q9UKR8 245 aa17.93■□□□□ 0.46
IRF1-202ENST00000405885 TDRD15B5MCY1 1934 aaKnown RBP17.93■□□□□ 0.46
IRF1-202ENST00000405885 M0QYV0 167 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 ATP2C2O75185 946 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 MMP8P22894 467 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 PSMC1P62191 440 aaKnown RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 TUSC3Q13454 348 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 TIGD5Q53EQ6 642 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 SGO2Q562F6 1265 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 CYP4A22Q5TCH4 519 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 COG1Q8WTW3 980 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 CAPZA3Q96KX2 299 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 DNAJB4Q9UDY4 337 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 STXBP5LQ9Y2K9 1186 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 CDH23Q9H251 3354 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 TANC1Q9C0D5 1861 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 TMEM110-MUSTN1A8MSY1 372 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 PIK3R2O00459 728 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 CLTBP09497 229 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 VDRP11473 427 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 CCDC130P13994 396 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 NAA30Q147X3 362 aaPredicted RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 PHF13Q86YI8 300 aaPredicted RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 ZNF564Q8TBZ8 553 aaPredicted RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 CARD6Q9BX69 1037 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 PRDM5Q9NQX1 630 aaPredicted RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 TBC1D13Q9NVG8 400 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.46
IRF1-202ENST00000405885 SAR1BQ9Y6B6 198 aa17.92■□□□□ 0.46
IRF1-202ENST00000405885 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
IRF1-202ENST00000405885 TULP2O00295 520 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 KIF4AO95239 1232 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 CXCL10P02778 98 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 PTPN20Q4JDL3 420 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 NOMO2Q5JPE7 1267 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 MEI1Q5TIA1 1274 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 KIAA0319Q5VV43 1072 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 RHOT2Q8IXI1 618 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 CPXM1Q96SM3 734 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 TMEM161AQ9NX61 479 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 CDC23Q9UJX2 597 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 TRIM43BA6NCK2 446 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 MED7O43513 233 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 LSM8O95777 96 aaKnown RBP17.91■□□□□ 0.46
IRF1-202ENST00000405885 RPL9P32969 192 aaKnown RBP17.91■□□□□ 0.46
IRF1-202ENST00000405885 CDH5P33151 784 aaPredicted RBP17.91■□□□□ 0.46
IRF1-202ENST00000405885 CNGA2Q16280 664 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 DAB2IPQ5VWQ8 1189 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 DSTYKQ6XUX3 929 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
IRF1-202ENST00000405885 SLFN11Q7Z7L1 901 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 TTC30AQ86WT1 665 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 TOP6BLQ8N6T0 577 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 ANKLE1Q8NAG6 615 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 MYRIPQ8NFW9 859 aa17.91■□□□□ 0.46
IRF1-202ENST00000405885 TRIM43Q96BQ3 446 aaPredicted RBP17.91■□□□□ 0.46
IRF1-202ENST00000405885 SMARCAL1Q9NZC9 954 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms