RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PDXDC1Q6P996 788 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 LRSAM1Q6UWE0 723 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 DDX53Q86TM3 631 aaKnown RBP11.33□□□□□ -0.6
RPAIN-204ENST00000405578 TRIM59Q8IWR1 403 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 AOPEPQ8N6M6 819 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 APPL2Q8NEU8 664 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 OR5B17Q8NGF7 314 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 AUTS2Q8WXX7 1259 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 RABGGTAQ92696 567 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 BORCS6Q96GS4 357 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 HPDLQ96IR7 371 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 PAAF1Q9BRP4 392 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 FUCA2Q9BTY2 467 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 MMRN2Q9H8L6 949 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 NCDNQ9UBB6 729 aa11.33□□□□□ -0.6
RPAIN-204ENST00000405578 ATRXP46100 2492 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 KCNJ18B7U540 433 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 PES1O00541 588 aaKnown RBP11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SYN3O14994 580 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 P4HA2O15460 535 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
RPAIN-204ENST00000405578 C4BPAP04003 597 aaKnown RBP11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SOD2P04179 222 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 URODP06132 367 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 ODC1P11926 461 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
RPAIN-204ENST00000405578 LILRA4P59901 499 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 TNNC1P63316 161 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 DLG4P78352 724 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 CREMQ03060 361 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 KCNJ12Q14500 433 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SGSM1Q2NKQ1 1148 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 ZACNQ401N2 412 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 FAM171A1Q5VUB5 890 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 GPR149Q86SP6 731 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SUMF1Q8NBK3 374 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 FBXL13Q8NEE6 735 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 FAM200AQ8TCP9 573 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 PLEKHO2Q8TD55 490 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 TAF4BQ92750 862 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 MED15Q96RN5 788 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SFXN1Q9H9B4 322 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
RPAIN-204ENST00000405578 FANCLQ9NW38 375 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 MARCH5Q9NX47 278 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 IGSF9Q9P2J2 1179 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 WNT16Q9UBV4 365 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 DSEQ9UL01 958 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
RPAIN-204ENST00000405578 KPNA7A9QM74 516 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 HUS1O60921 280 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 SDHBP21912 280 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 FMO5P49326 533 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 ZNF445P59923 1031 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 MYL7Q01449 175 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 ZNF699Q32M78 642 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 TMEM173Q86WV6 379 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 METTL23Q86XA0 190 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 CEP57Q86XR8 500 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 SUSD3Q96L08 255 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 TTPALQ9BTX7 342 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 HERC2P3Q9BVR0 1158 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 FAM208BQ5VWN6 2430 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 RALGAPA1Q6GYQ0 2036 aa11.31□□□□□ -0.6
RPAIN-204ENST00000405578 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
RPAIN-204ENST00000405578 COL4A3Q01955 1670 aa11.3□□□□□ -0.6
RPAIN-204ENST00000405578 DCDC2BA2VCK2 349 aa11.3□□□□□ -0.6
RPAIN-204ENST00000405578 H7C4K7 107 aa11.3□□□□□ -0.6
RPAIN-204ENST00000405578 CYB561D2O14569 222 aa11.3□□□□□ -0.6
RPAIN-204ENST00000405578 PMM2O15305 246 aa11.3□□□□□ -0.6
RPAIN-204ENST00000405578 STAU1O95793 577 aaKnown RBP11.3□□□□□ -0.6
RPAIN-204ENST00000405578 HLA-DRAP01903 254 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms