RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PHKBQ93100 1093 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 DCLRE1CQ96SD1 692 aaKnown RBP6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 MPHOSPH6Q99547 160 aaKnown RBP6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 REXO4Q9GZR2 422 aaKnown RBP6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 FNIP2Q9P278 1114 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 MAP3K2Q9Y2U5 619 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 MAST1Q9Y2H9 1570 aa6.1□□□□□ -1.43
HMGB3P19-201ENST00000403971 TEX14Q8IWB6 1497 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 SHANK2Q9UPX8 1470 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 AKNAQ7Z591 1439 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ISM1B1AKI9 464 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 TRIM24O15164 1050 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 GRPP07492 148 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 IFIT2P09913 472 aaKnown RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZNF20P17024 532 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZKSCAN1P17029 563 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 CHRM3P20309 590 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ALDH5A1P51649 535 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 UCP3P55916 312 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ADAM17P78536 824 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 SLC13A2Q13183 592 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 HDAC1Q13547 482 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 BOP1Q14137 746 aaKnown RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 SLC30A10Q6XR72 485 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZNF783Q6ZMS7 281 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 LRRC55Q6ZSA7 311 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 C1orf210Q8IVY1 113 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 STRBPQ96SI9 672 aaKnown RBP6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 PNKPQ96T60 521 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 DPH1Q9BZG8 443 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 BTBD1Q9H0C5 482 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 ETAA1Q9NY74 926 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 CEP72Q9P209 647 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 COL20A1Q9P218 1284 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 GCC2Q8IWJ2 1684 aa6.09□□□□□ -1.43
HMGB3P19-201ENST00000403971 MBD5Q9P267 1494 aa6.09□□□□□ -1.44
HMGB3P19-201ENST00000403971 DAPK1P53355 1430 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 POLRMTO00411 1230 aaKnown RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 TBC1D4O60343 1298 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 NCR1O76036 304 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 RECQL4O94761 1208 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZFPL1O95159 310 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 SLC11A2P49281 568 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 RPS16P62249 146 aaKnown RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 SLC25A3Q00325 362 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 EFEMP1Q12805 493 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 TAPT1Q6NXT6 567 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 PPP1R32Q7Z5V6 425 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 LIX1LQ8IVB5 337 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 MAPKAPK5Q8IW41 473 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 SLC15A4Q8N697 577 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 DNAJC5GQ8N7S2 189 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF483Q8TF39 744 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 FBXO41Q8TF61 875 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF700Q9H0M5 742 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 RNPEPQ9H4A4 650 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 AFF4Q9UHB7 1163 aaKnown RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 PLEKHM1Q9Y4G2 1056 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 SYCP2Q9BX26 1530 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 CCDC141Q6ZP82 1450 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 RICTORQ6R327 1708 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ABCC5O15440 1437 aa6.08□□□□□ -1.44
HMGB3P19-201ENST00000403971 ROCK1Q13464 1354 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 DIRC3C9JPN6 131 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 GPANK1O95872 356 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 CHEK2O96017 543 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 FDXRP22570 491 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 NR4A1P22736 598 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZFP36P26651 326 aaKnown RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SERPINB3P29508 390 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 TOB1P50616 345 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 CASP5P51878 434 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 MC2RQ01718 297 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 IFIT5Q13325 482 aaKnown RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 NRN1LQ496H8 165 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 B3GNTL1Q67FW5 361 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SRLQ86TD4 932 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SKAP1Q86WV1 359 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 MPP5Q8N3R9 675 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 DDX17Q92841 729 aaKnown RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SUCLG2Q96I99 432 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 TRIB1Q96RU8 372 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SMOQ99835 787 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 ELAC2Q9BQ52 826 aaKnown RBP6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 CNPPD1Q9BV87 410 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 SMOC2Q9H3U7 446 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 TESMINQ9Y4I5 508 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 FPGT-TNNI3KV9GXZ4 949 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 ADGRL1O94910 1474 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 ADGRL2O95490 1459 aa6.07□□□□□ -1.44
HMGB3P19-201ENST00000403971 PLXNC1O60486 1568 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 KDM5CP41229 1560 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ZNF644Q9H582 1327 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 ARHGEF12Q9NZN5 1544 aa6.06□□□□□ -1.44
HMGB3P19-201ENST00000403971 TRIM43BA6NCK2 446 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms