RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SHC3Q92529 594 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 FAM124BQ9H5Z6 455 aaPredicted RBP35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 DAAM1Q9Y4D1 1078 aa35.52■■■■□ 3.28
CSNK1E-204ENST00000403904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP35.52■■■■□ 3.282e-6■■□□□ 11.5
CSNK1E-204ENST00000403904 FOXN3O00409 490 aaPredicted RBP35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 LILRB3O75022 631 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 KRT5P13647 590 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 PDXDC1Q6P996 788 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 SPAG5Q96R06 1193 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 TMEM209Q96SK2 561 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 DPEP3Q9H4B8 488 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 MTRRQ9UBK8 725 aa35.51■■■■□ 3.28
CSNK1E-204ENST00000403904 RNF225M0QZC1 329 aaPredicted RBP35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 TBC1D4O60343 1298 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 LPXNO60711 386 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 USP8P40818 1118 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 BMS1Q14692 1282 aaKnown RBP35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 UNC93AQ86WB7 457 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 ACBD6Q9BR61 282 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 ELOVL4Q9GZR5 314 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 SSX2IPQ9Y2D8 614 aa35.51■■■■□ 3.27
CSNK1E-204ENST00000403904 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 F8VZ95 297 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 FSCN2O14926 492 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 GYPCP04921 128 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 PCSK1P29120 753 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 JAM2P57087 298 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 SMC1AQ14683 1233 aaKnown RBP35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 NT5C1AQ9BXI3 368 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 NGRNQ9NPE2 291 aaKnown RBP35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 BACE2Q9Y5Z0 518 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 CDY1Q9Y6F8 540 aa35.5■■■■□ 3.27
CSNK1E-204ENST00000403904 ATG2AQ2TAZ0 1938 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 HIDE1A8MVS5 230 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 ATP2C2O75185 946 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 PSMC1P62191 440 aaKnown RBP35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 ACOT1Q86TX2 421 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 GLYCTKQ8IVS8 523 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 GPR65Q8IYL9 337 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 MRPL43Q8N983 215 aaKnown RBP35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 BAP1Q92560 729 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 CLSTN3Q9BQT9 956 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 LMAN2LQ9H0V9 348 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 PRDM12Q9H4Q4 367 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 CNTN6Q9UQ52 1028 aa35.49■■■■□ 3.27
CSNK1E-204ENST00000403904 ADAM12O43184 909 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 OR4Q2P0C623 313 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 RAD23BP54727 409 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 GRIN2CQ14957 1233 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 HABP4Q5JVS0 413 aaKnown RBP35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 RBBP8NLQ8NC74 664 aaPredicted RBP35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 LPIN3Q9BQK8 851 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 SYT15Q9BQS2 421 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 EDEM3Q9BZQ6 932 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 CDH9Q9ULB4 789 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 IRAK3Q9Y616 596 aa35.48■■■■□ 3.27
CSNK1E-204ENST00000403904 OR6C75A6NL08 312 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 CDR1P51861 262 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 ARPP19P56211 112 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 ZNF697Q5TEC3 545 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 SLC4A11Q8NBS3 891 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 TMEM176AQ96HP8 235 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 RXFP1Q9HBX9 757 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 CAPN11Q9UMQ6 739 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 C2orf71A6NGG8 1288 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 CNPP09543 421 aaKnown RBP35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 CASP14P31944 242 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 OR1D2P34982 312 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 FXR1P51114 621 aaKnown RBP eCLIP35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 CCDC142Q17RM4 750 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 PPFIBP1Q86W92 1011 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 GPIHBP1Q8IV16 184 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 DRC7Q8IY82 874 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 FAM71AQ8IYT1 594 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 IQCDQ96DY2 449 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 FAM161BQ96MY7 647 aa35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 OXCT2Q9BYC2 517 aaPredicted RBP35.47■■■■□ 3.27
CSNK1E-204ENST00000403904 A0A1W2PQJ5 194 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 TEX28O15482 410 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 CDC25BP30305 580 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 ZNF132P52740 706 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 TSPY1Q01534 308 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 INTS6LQ5JSJ4 861 aaKnown RBP35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 SLC8B1Q6J4K2 584 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 PDE12Q6L8Q7 609 aaKnown RBP35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 LRRTM3Q86VH5 581 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 B3GALNT2Q8NCR0 500 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 TNIP3Q96KP6 325 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 ZCWPW1Q9H0M4 648 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 CRTAC1Q9NQ79 661 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 FNIP2Q9P278 1114 aa35.46■■■■□ 3.27
CSNK1E-204ENST00000403904 MYBPHLA2RUH7 354 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 CYP26A1O43174 497 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 PTPN1P18031 435 aaKnown RBP35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 STAT1P42224 750 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 TRIM14Q14142 442 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 CRYBG2Q8N1P7 616 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 GTF3C4Q9UKN8 822 aa35.45■■■■□ 3.27
CSNK1E-204ENST00000403904 LRRC53A6NM62 1247 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms