RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ATP11BQ9Y2G3 1177 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 MAP3K2Q9Y2U5 619 aa4.68□□□□□ -1.66
HMGB1P17-201ENST00000403495 CCDC189A1A4V9 331 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 MBD3L4A6NDZ8 208 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 MBD3L3A6NE82 208 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 AQP12BA6NM10 295 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 hCG_1984214I3L0E3 225 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ADAMTS3O15072 1205 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 THAP12O43422 761 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZFPL1O95159 310 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ANXA1P04083 346 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ELANEP08246 267 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 MGAT1P26572 445 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 KLRC1P26715 233 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 PDIA3P30101 505 aaKnown RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ALDH9A1P49189 494 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 OCA2Q04671 838 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 KCNAB1Q14722 419 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 PUM3Q15397 648 aaKnown RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 AMOTQ4VCS5 1084 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 CCDC38Q502W7 563 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 C4orf46Q504U0 113 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 PLA1AQ53H76 456 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 AGAP9Q5VTM2 703 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 SPOCD1Q6ZMY3 1216 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 USP49Q70CQ1 688 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ATG16L2Q8NAA4 619 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF527Q8NB42 609 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 MYRIPQ8NFW9 859 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 SPSB4Q96A44 273 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 TMEM41AQ96HV5 264 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 COLEC11Q9BWP8 271 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF768Q9H5H4 540 aaKnown RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 OBP2BQ9NPH6 170 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 TRPM5Q9NZQ8 1165 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 CTTNBP2NLQ9P2B4 639 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 ST6GALNAC2Q9UJ37 374 aa4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 MRPS17Q9Y2R5 130 aaKnown RBP4.67□□□□□ -1.66
HMGB1P17-201ENST00000403495 A0A1B0GTW7 788 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 PATE3B3GLJ2 98 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 PODXLO00592 558 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 TOR1BO14657 336 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 PLA2G6O60733 806 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM20BO75063 409 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF623O75123 536 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 CHEK2O96017 543 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 SPATA31D3P0C874 917 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 COMTP21964 271 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 HIBADHP31937 336 aaKnown RBP4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 FAM189BP81408 668 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 HHEXQ03014 270 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 GALNT1Q10472 559 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 GRM1Q13255 1194 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 CRHR2Q13324 411 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 ARHGAP15Q53QZ3 475 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 DCAF17Q5H9S7 520 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 CACHD1Q5VU97 1274 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 ZNF585AQ6P3V2 769 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 FBXO38Q6PIJ6 1188 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 MAMDC4Q6UXC1 1216 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 SPATA31D4Q6ZUB0 917 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 RHOT2Q8IXI1 618 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 ANKRD35Q8N283 1001 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 GLIS1Q8NBF1 620 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 HEPHQ9BQS7 1158 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 SELENOOQ9BVL4 669 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 MSL2Q9HCI7 577 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 PARD6AQ9NPB6 346 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 SERHLQ9NQF3 203 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 LUZP4Q9P127 313 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 GRHPRQ9UBQ7 328 aa4.66□□□□□ -1.66
HMGB1P17-201ENST00000403495 CCDC195A0A1B0GUA6 201 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 LGALS16A8MUM7 142 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 AHRRA9YTQ3 701 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 TRIM38O00635 465 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 ERN1O75460 977 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 SUN1O94901 812 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 SCAF4O95104 1147 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 TNFRSF6BO95407 300 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 A1BGP04217 495 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 BTF3P20290 206 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 ACVR2AP27037 513 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 IL1R2P27930 398 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 TXKP42681 527 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 GCLCP48506 637 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 PTDSS1P48651 473 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 MAN2A2P49641 1150 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 MXRA7P84157 204 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 KRT17Q04695 432 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZNF844Q08AG5 666 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 RRP1BQ14684 758 aaKnown RBP4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 KRT72Q14CN4 511 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 IQCB1Q15051 598 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 PTCHD3Q3KNS1 767 aa4.65□□□□□ -1.67
HMGB1P17-201ENST00000403495 CRTC1Q6UUV9 634 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms