RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 BCO2Q9BYV7 579 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 A0A087WZ62 844 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 MEFVO15553 781 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 TJP3O95049 919 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 TTC4O95801 387 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 LGALS2P05162 132 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 STAG3L1P0CL83 205 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 CHN1P15882 459 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 ATF7P17544 494 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 KLRC2P26717 231 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 PHKA2P46019 1235 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 PTPN20Q4JDL3 420 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 MFSD5Q6N075 450 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 TAPT1Q6NXT6 567 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 ARMC9Q7Z3E5 817 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 ZC3H15Q8WU90 426 aaKnown RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 XPO6Q96QU8 1125 aaKnown RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 PPP1R16BQ96T49 567 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 FDXACB1Q9BRP7 624 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 STMN4Q9H169 189 aaPredicted RBP17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 LHX5Q9H2C1 402 aa17.92■□□□□ 0.46
DNMT3A-205ENST00000402667 A0A087WUV0 522 aaPredicted RBP17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 LIASO43766 372 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 RAD23BP54727 409 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 POU5F1BQ06416 359 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 AMHR2Q16671 573 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 KYNUQ16719 465 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 FAM187BQ17R55 369 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 LONRF1Q17RB8 773 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 SPOCD1Q6ZMY3 1216 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 GSTA5Q7RTV2 222 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 NIPA2Q8N8Q9 360 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 BBOF1Q8ND07 529 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 SDCBP2Q9H190 292 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 CYTH4Q9UIA0 394 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 DNPEPQ9ULA0 475 aa17.91■□□□□ 0.46
DNMT3A-205ENST00000402667 COPS2P61201 443 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 SNAPC2Q13487 334 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 QPCTQ16769 361 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 IZUMO3Q5VZ72 239 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 JADE1Q6IE81 842 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 MICALCLQ6ZW33 695 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 TJP2Q9UDY2 1190 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 STRIP2Q9ULQ0 834 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 ATXN2Q99700 1313 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 MED7O43513 233 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 ITGB3P05106 788 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 MCF2P10911 925 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 EPHX2P34913 555 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 RFC1P35251 1148 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 LMNB2Q03252 620 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 DRICH1Q6PGQ1 229 aaPredicted RBP17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 MAMDC4Q6UXC1 1216 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 LINC01465Q8N7H1 131 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 DDX20Q9UHI6 824 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 GGA2Q9UJY4 613 aa17.9■□□□□ 0.46
DNMT3A-205ENST00000402667 GOLGA8SH3BPF8 625 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 MAGEB2O15479 319 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 POLR2BP30876 1174 aaKnown RBP17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 TNFAIP2Q03169 654 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 ORC1Q13415 861 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 ZNF792Q3KQV3 632 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 LDLRAD1Q5T700 205 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 IFNLR1Q8IU57 520 aaPredicted RBP17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 GPRC5AQ8NFJ5 357 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 CXorf38Q8TB03 319 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 CPB2Q96IY4 423 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 SERPINB12Q96P63 405 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 PDZD7Q9H5P4 517 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 SMYD3Q9H7B4 428 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 DDX56Q9NY93 547 aaKnown RBP17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 NINJ2Q9NZG7 142 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 AKT3Q9Y243 479 aa17.89■□□□□ 0.46
DNMT3A-205ENST00000402667 hCG_1818297A0A087WSY0 165 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 C5orf60A6NFR6 353 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 SIGLEC16A6NMB1 481 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 GH1P01241 217 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 KRT3P12035 628 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 PTPN7P35236 360 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 P3H1Q32P28 736 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 CCDC38Q502W7 563 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 TFDP3Q5H9I0 405 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 HIBCHQ6NVY1 386 aaPredicted RBP17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 EXOC3L1Q86VI1 746 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 GLIS1Q8NBF1 620 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 SLC4A11Q8NBS3 891 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 IPO4Q8TEX9 1081 aaKnown RBP17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 AFG1LQ8WV93 481 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 ATXN2LQ8WWM7 1075 aaKnown RBP17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 FAXDC2Q96IV6 333 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 TWNKQ96RR1 684 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 SPON1Q9HCB6 807 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 ZNF148Q9UQR1 794 aa17.89■□□□□ 0.45
DNMT3A-205ENST00000402667 LRRD1A4D1F6 860 aa17.88■□□□□ 0.45
DNMT3A-205ENST00000402667 KIAA0754O94854 1291 aa17.88■□□□□ 0.45
DNMT3A-205ENST00000402667 ITGBL1O95965 494 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-205ENST00000402667 VTNP04004 478 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms