RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 GIT1Q9Y2X7 761 aa27.2■■□□□ 1.95
CPNE1-205ENST00000401607 TCRBV5S1A1TA0A578 114 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 MIF4GDA9UHW6 222 aaKnown RBP27.2■■□□□ 1.94
CPNE1-205ENST00000401607 RAB27AP51159 221 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 RNASE9P60153 205 aaKnown RBP27.2■■□□□ 1.94
CPNE1-205ENST00000401607 CNGA2Q16280 664 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 SGO2Q562F6 1265 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 ALG3Q92685 438 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 KRT35Q92764 455 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 SELENOOQ9BVL4 669 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 MRPL47Q9HD33 250 aaKnown RBP27.2■■□□□ 1.94
CPNE1-205ENST00000401607 SCINQ9Y6U3 715 aa27.2■■□□□ 1.94
CPNE1-205ENST00000401607 MARCKSL1P49006 195 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 MBTPS1Q14703 1052 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 SV2CQ496J9 727 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 PTPN20Q4JDL3 420 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 LIMS2Q7Z4I7 341 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 PNKPQ96T60 521 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 ADAM2Q99965 735 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 PAK6Q9NQU5 681 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-205ENST00000401607 RBM12Q9NTZ6 932 aaKnown RBP27.19■■□□□ 1.94
CPNE1-205ENST00000401607 KIAA1257Q9ULG3 409 aa27.19■■□□□ 1.94
CPNE1-205ENST00000401607 A0A0U1RQF3 1178 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 ARL5CA6NH57 179 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 ERICH1Q86X53 443 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 UBE2Q2Q8WVN8 375 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 KBTBD7Q8WVZ9 684 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 WNT8AQ9H1J5 351 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 CARD9Q9H257 536 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 SLC38A7Q9NVC3 462 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 PARVAQ9NVD7 372 aa27.18■■□□□ 1.94
CPNE1-205ENST00000401607 RNF216Q9NWF9 866 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-205ENST00000401607 DNM1LO00429 736 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 GJB6O95452 261 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 LILRA4P59901 499 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 BRCA2P51587 3418 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 SPOPO43791 374 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 FGFR1P11362 822 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 CTNNA2P26232 953 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 PEX5P50542 639 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 CDK7P50613 346 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 MTFR1Q15390 333 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 UNC93AQ86WB7 457 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 C12orf29Q8N999 325 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 FEZF2Q8TBJ5 459 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.17■■□□□ 1.944e-13■■■■■ 56.2
CPNE1-205ENST00000401607 BEGAINQ9BUH8 593 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 CACNG4Q9UBN1 327 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 TMEM59LQ9UK28 342 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 L1RE1Q9UN81 338 aa27.17■■□□□ 1.94
CPNE1-205ENST00000401607 M0QYV0 167 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 MYO1FO00160 1098 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 PGRMC1O00264 195 aaKnown RBP27.16■■□□□ 1.94
CPNE1-205ENST00000401607 THP07101 528 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 CTNNA1P35221 906 aaKnown RBP27.16■■□□□ 1.94
CPNE1-205ENST00000401607 SCNN1GP51170 649 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 LCLAT1Q6UWP7 414 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 ACOT1Q86TX2 421 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 UBL4BQ8N7F7 174 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 OR6B3Q8NGW1 331 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 TSPYL2Q9H2G4 693 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-205ENST00000401607 TJP2Q9UDY2 1190 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 TSPAN16Q9UKR8 245 aa27.16■■□□□ 1.94
CPNE1-205ENST00000401607 HCRTO43612 131 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 MYCP01106 439 aaPredicted RBP27.15■■□□□ 1.94
CPNE1-205ENST00000401607 IGFBP6P24592 240 aaPredicted RBP27.15■■□□□ 1.94
CPNE1-205ENST00000401607 GPD2P43304 727 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 CYP4A22Q5TCH4 519 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 DPH6Q7L8W6 267 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 PDCL2Q8N4E4 241 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 CPXM1Q96SM3 734 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 RAB21Q9UL25 225 aa27.15■■□□□ 1.94
CPNE1-205ENST00000401607 TTC7AQ9ULT0 858 aaPredicted RBP27.15■■□□□ 1.94
CPNE1-205ENST00000401607 PROSCO94903 275 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 PPP1R15BQ5SWA1 713 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 DNAJC24Q6P3W2 148 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 DEFB118Q96PH6 123 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 DPEP3Q9H4B8 488 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 RSAD1Q9HA92 442 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 PCDHA3Q9Y5H8 950 aa27.14■■□□□ 1.94
CPNE1-205ENST00000401607 CCDC66A2RUB6 948 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 CLCN6P51797 869 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 RPL7AP62424 266 aaKnown RBP27.14■■□□□ 1.93
CPNE1-205ENST00000401607 ZNF211Q13398 564 aaPredicted RBP27.14■■□□□ 1.93
CPNE1-205ENST00000401607 STILQ15468 1287 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 PPP1R26Q5T8A7 1209 aaPredicted RBP27.14■■□□□ 1.93
CPNE1-205ENST00000401607 RNF169Q8NCN4 708 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 C3orf20Q8ND61 904 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 APPL2Q8NEU8 664 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 UBA3Q8TBC4 463 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 RNPC3Q96LT9 517 aaKnown RBP27.14■■□□□ 1.93
CPNE1-205ENST00000401607 STRIP2Q9ULQ0 834 aa27.14■■□□□ 1.93
CPNE1-205ENST00000401607 TMEM191CA6NGB0 347 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 A8MXQ7 604 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 SLC1A1P43005 524 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 PDCLQ13371 301 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 GOLGA7BQ2TAP0 167 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 ZNF598Q86UK7 904 aaKnown RBP27.13■■□□□ 1.93
CPNE1-205ENST00000401607 ECHDC2Q86YB7 292 aa27.13■■□□□ 1.93
CPNE1-205ENST00000401607 FAM126BQ8IXS8 530 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms