RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 METTL5Q9NRN9 209 aaKnown RBP19.32■□□□□ 0.68
USP25-204ENST00000400183 NAGPAQ9UK23 515 aa19.32■□□□□ 0.68
USP25-204ENST00000400183 PXDNLA1KZ92 1463 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 ERFP50548 548 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 ZNF157P51786 506 aaPredicted RBP19.31■□□□□ 0.68
USP25-204ENST00000400183 LRRC74AQ0VAA2 488 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 SLITRK1Q96PX8 696 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 CDY2AQ9Y6F7 541 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 CDY1Q9Y6F8 540 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 FAM200BP0CF97 657 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 TAF6P49848 677 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 NEK2P51955 445 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 CORO7P57737 925 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 MMGT1Q8N4V1 131 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 EME1Q96AY2 570 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 UPP2O95045 317 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 CARSP49589 748 aaKnown RBP19.31■□□□□ 0.68
USP25-204ENST00000400183 DAGLBQ8NCG7 672 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 LINC00116Q8NCU8 138 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 FAM129AQ9BZQ8 928 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 CARD9Q9H257 536 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 AGPAT3Q9NRZ7 376 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 TBX20Q9UMR3 447 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 NCAM1P13591 858 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 MUTP22033 750 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 PLA2G4AP47712 749 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 KLK7P49862 253 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 RPS6P62753 249 aaKnown RBP19.31■□□□□ 0.68
USP25-204ENST00000400183 EFL1Q7Z2Z2 1120 aaKnown RBP19.31■□□□□ 0.68
USP25-204ENST00000400183 CLEC4FQ8N1N0 589 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 ZNF669Q96BR6 464 aaPredicted RBP19.31■□□□□ 0.68
USP25-204ENST00000400183 TMEM39BQ9GZU3 492 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 BLOC1S6Q9UL45 172 aa19.31■□□□□ 0.68
USP25-204ENST00000400183 BRD2P25440 801 aaKnown RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 OR1G1P47890 313 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 TJAP1Q5JTD0 557 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 ZNF467Q7Z7K2 595 aaPredicted RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 SETD3Q86TU7 594 aaPredicted RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 CELF4Q9BZC1 486 aaKnown RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 HARS2P49590 506 aaKnown RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 EPC2Q52LR7 807 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 KLF6Q99612 283 aaPredicted RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 MYOZ2Q9NPC6 264 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 PPP1R3GB7ZBB8 358 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 HNRNPRO43390 633 aaKnown RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 RPS12P25398 132 aaKnown RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 COILP38432 576 aaPredicted RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 DEFB129Q9H1M3 183 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 RIC8BQ9NVN3 520 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 IRX1P78414 480 aaPredicted RBP19.3■□□□□ 0.68
USP25-204ENST00000400183 LVRNQ6Q4G3 990 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 SEC16BQ96JE7 1060 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 GPR63Q9BZJ6 419 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 ZNF556Q9HAH1 456 aa19.3■□□□□ 0.68
USP25-204ENST00000400183 AIM2O14862 343 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CLASP2O75122 1294 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 NPTXRO95502 500 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 TRPM8Q7Z2W7 1104 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 THTPAQ9BU02 230 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 TMEM106CQ9BVX2 250 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 OLFML3Q9NRN5 406 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 ENO4A6NNW6 628 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CTDNEP1O95476 244 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CETPP11597 493 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 LSP1P33241 339 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 GMPSP49915 693 aaPredicted RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 FAM71DQ8N9W8 422 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 E2F7Q96AV8 911 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 TAAR1Q96RJ0 339 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CCDC134Q9H6E4 229 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 GID8Q9NWU2 228 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CCL15-CCL14A0A0B4J2E2 113 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 FKBP9O95302 570 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 ARIH2O95376 493 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 STIP1P31948 543 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 IRAK1P51617 712 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 BLVRAP53004 296 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 PPP4CP60510 307 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 MKRN4PQ13434 485 aaPredicted RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 MAPRE1Q15691 268 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 CCL15Q16663 113 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 FKBP9P1Q75LS8 142 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 ZIM3Q96PE6 472 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 FAM107AO95990 144 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
USP25-204ENST00000400183 IRF1P10914 325 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 FNTAP49354 379 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 RAP1GDS1P52306 607 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 CUL2Q13617 745 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 ACAD10Q6JQN1 1059 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 LINC00523Q86TU6 105 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 DDX42Q86XP3 938 aaKnown RBP eCLIP19.29■□□□□ 0.68
USP25-204ENST00000400183 SNX31Q8N9S9 440 aa19.29■□□□□ 0.68
USP25-204ENST00000400183 ITGB3P05106 788 aa19.28■□□□□ 0.68
USP25-204ENST00000400183 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
USP25-204ENST00000400183 C1orf131Q8NDD1 294 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms