RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 RALGAPA2Q2PPJ7 1873 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 EDRF1Q3B7T1 1238 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KCNT1Q5JUK3 1230 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NOTUMQ6P988 496 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 BARGINQ6ZT62 677 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 C3orf67Q6ZVT6 689 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TRAPPC11Q7Z392 1133 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 FAM71DQ8N9W8 422 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ICA1LQ8NDH6 482 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 HASPINQ8TF76 798 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 SEPT1Q8WYJ6 367 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ATG4AQ8WYN0 398 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ULK4Q96C45 1275 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PABPC5Q96DU9 382 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 MED15Q96RN5 788 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MYCBPQ99417 103 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 TSSK1BQ9BXA7 367 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ING2Q9H160 280 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TRABDQ9H4I3 376 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PCDHB7Q9Y5E2 793 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 GREB1LQ9C091 1923 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 FAM205AQ6ZU69 1335 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ZBTB22O15209 634 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 AKAP3O75969 853 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NR3C2P08235 984 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DPEP1P16444 411 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 VCAM1P19320 739 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 YY1P25490 414 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ATICP31939 592 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 SREBF1P36956 1147 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MDH1P40925 334 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 BACE1P56817 501 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DNAJC3Q13217 504 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 SEC23AQ15436 765 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KCTD19Q17RG1 926 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 ANKRD20A4Q4UJ75 823 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ANKRD20A8PQ5CZ79 823 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ANKRD20A2Q5SQ80 823 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MROH9Q5TGP6 573 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ANKRD20A1Q5TYW2 823 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TRIM65Q6PJ69 517 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 TMA16Q96EY4 203 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 SEC16BQ96JE7 1060 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ZNF512Q96ME7 567 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 ERGIC2Q96RQ1 377 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 EGFL8Q99944 293 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 HAUS8Q9BT25 410 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MUC3BQ9H195 1237 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PXMP2Q9NR77 195 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KCND2Q9NZV8 630 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 USP18Q9UMW8 372 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PLAGL2Q9UPG8 496 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CHMP2BQ9UQN3 213 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CAPN6Q9Y6Q1 641 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 BRCA1P38398 1863 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 PHIPQ8WWQ0 1821 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DOCK4Q8N1I0 1966 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DDTLA6NHG4 134 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 TRIM66O15016 1216 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ANP32DO95626 131 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 GNL1P36915 607 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 CAP2P40123 477 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 INPP1P49441 399 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 GIT2Q14161 759 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 GOLGA7BQ2TAP0 167 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MGAT5BQ3V5L5 792 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.41□□□□□ -1.86
KNL1-202ENST00000399668 FAXCQ5TGI0 409 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KLHDC7AQ5VTJ3 777 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MORC4Q8TE76 937 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 AKT1S1Q96B36 256 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 FAM136AQ96C01 138 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CENPKQ9BS16 269 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DRC3Q9H069 523 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 COG4Q9H9E3 785 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 C20orf96Q9NUD7 363 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 ZC3H7BQ9UGR2 993 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 FAF1Q9UNN5 650 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 XIRP1Q702N8 1843 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 TIAM2Q8IVF5 1701 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 DOCK2Q92608 1830 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CCL15-CCL14A0A0B4J2E2 113 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 IQCA1LA6NCM1 817 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PFDN1O60925 122 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CDH16O75309 829 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 PMPCBO75439 489 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NPTXRO95502 500 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 SYF2O95926 243 aaKnown RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 ENO3P13929 434 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 NNMTP40261 264 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 KCNJ6P48051 423 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 MDM2Q00987 491 aaPredicted RBP3.41□□□□□ -1.86
KNL1-202ENST00000399668 DEUP1Q05D60 604 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 NR1H3Q13133 447 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 GRB10Q13322 594 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 CCL15Q16663 113 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 LVRNQ6Q4G3 990 aa3.41□□□□□ -1.86
KNL1-202ENST00000399668 ACOT1Q86TX2 421 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms