RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 CFHP08603 1231 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 HARSP12081 509 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 COMTP21964 271 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 VEGFBP49765 207 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 TNNC1P63316 161 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 ITGA7Q13683 1181 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 DRICH1Q6PGQ1 229 aaPredicted RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 CXCL17Q6UXB2 119 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 CCNI2Q6ZMN8 369 aaPredicted RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 TMEM110Q86TL2 294 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 TMEM86AQ8N2M4 240 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 CAGE1Q8TC20 777 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FAM71BQ8TC56 605 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 CD99L2Q8TCZ2 262 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 AENQ8WTP8 325 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 KBTBD7Q8WVZ9 684 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 MAIP1Q8WWC4 291 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 DDX27Q96GQ7 796 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 NCAPGQ9BPX3 1015 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 NT5C1AQ9BXI3 368 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FAM49AQ9H0Q0 323 aaPredicted RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 ELAC1Q9H777 363 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 SMYD3Q9H7B4 428 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 RGS18Q9NS28 235 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FAM105AQ9NUU6 356 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 ADAM22Q9P0K1 906 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 PUF60Q9UHX1 559 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 L1RE1Q9UN81 338 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 ST3GAL5Q9UNP4 418 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 COL4A6Q14031 1691 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 EOMESO95936 686 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 RRM1P23921 792 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 USP8P40818 1118 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 DHX34Q14147 1143 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 PIGHQ14442 188 aaPredicted RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 LPIN1Q14693 890 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 PTGISQ16647 500 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 WDR72Q3MJ13 1102 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 NAA35Q5VZE5 725 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 BNIPLQ7Z465 357 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 ARRDC4Q8NCT1 418 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FAM84AQ96KN4 292 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FRMD8P1Q9BZ68 369 aaPredicted RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 LRRC19Q9H756 370 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 PIN4Q9Y237 131 aaKnown RBP7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 CEP83Q9Y592 693 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 NME7Q9Y5B8 376 aa7.25□□□□□ -1.25
CX3CR1-202ENST00000399220 FAM187AA6NFU0 413 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 DNM1LO00429 736 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 KCNK3O14649 394 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 TLR3O15455 904 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ERLIN1O75477 346 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 PGK1P00558 417 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ABCB4P21439 1286 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 TAF6P49848 677 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CBX1P83916 185 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ZNF252P-AS1Q0IIN9 211 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 KLF1Q13351 362 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SOWAHAQ2M3V2 549 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CCDC70Q6NSX1 233 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 XYLT1Q86Y38 959 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 C1orf131Q8NDD1 294 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 EXD1Q8NHP7 514 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ALG3Q92685 438 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SCLT1Q96NL6 688 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 TWNKQ96RR1 684 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 C11orf84Q9BUA3 381 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 RBM12Q9NTZ6 932 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ASNSD1Q9NWL6 643 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 STIM2Q9P246 746 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 TUBGCP4Q9UGJ1 667 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CYTH4Q9UIA0 394 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 OGDHLQ9ULD0 1010 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 V9GYY5 206 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 M0QZQ0 153 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CSDE1O75534 798 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 MICAL2O94851 1124 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 PARNO95453 639 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 FGFR4P22455 802 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 GBP1P32455 592 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 FNTAP49354 379 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 RWDD2BP57060 319 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SNX16P57768 344 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SGO2Q562F6 1265 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 TEX35Q5T0J7 233 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 DENND1BQ6P3S1 775 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SYDE1Q6ZW31 735 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CDR2LQ86X02 465 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CRIPAKQ8N1N5 446 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 SLC35F5Q8WV83 523 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CPA5Q8WXQ8 436 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 KCTD13Q8WZ19 329 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 PGBD4Q96DM1 585 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 RNPC3Q96LT9 517 aaKnown RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 CXCL16Q9H2A7 254 aa7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 HMX1Q9NP08 348 aaPredicted RBP7.24□□□□□ -1.25
CX3CR1-202ENST00000399220 HOMER3Q9NSC5 361 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms